Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH8O95206 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH8O95206 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH8O95206 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH8O95206 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH8O95206 RBM17P2-201ENST00000616397 1405 ntBASIC20.97■□□□□ 0.95
PCDH8O95206 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH8O95206 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH8O95206 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCDH8O95206 GUSBP6-202ENST00000438529 1198 ntBASIC20.97■□□□□ 0.95
PCDH8O95206 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.97■□□□□ 0.95
PCDH8O95206 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.97■□□□□ 0.95
PCDH8O95206 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.97■□□□□ 0.95
PCDH8O95206 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH8O95206 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH8O95206 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.97■□□□□ 0.95
PCDH8O95206 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH8O95206 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH8O95206 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCDH8O95206 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH8O95206 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH8O95206 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH8O95206 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH8O95206 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH8O95206 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.96■□□□□ 0.95
PCDH8O95206 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.96■□□□□ 0.95
PCDH8O95206 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH8O95206 AC069236.1-201ENST00000604339 616 ntBASIC20.96■□□□□ 0.95
PCDH8O95206 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH8O95206 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH8O95206 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.96■□□□□ 0.95
PCDH8O95206 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH8O95206 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCDH8O95206 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH8O95206 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PCDH8O95206 C11orf96-202ENST00000528572 1834 ntBASIC20.95■□□□□ 0.94
PCDH8O95206 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH8O95206 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH8O95206 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PCDH8O95206 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH8O95206 AL138781.1-201ENST00000566567 1274 ntBASIC20.95■□□□□ 0.94
PCDH8O95206 AC142086.2-201ENST00000569753 217 ntBASIC20.95■□□□□ 0.94
PCDH8O95206 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
PCDH8O95206 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH8O95206 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH8O95206 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH8O95206 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PCDH8O95206 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDH8O95206 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH8O95206 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH8O95206 PKD1P6-201ENST00000343738 4769 ntBASIC20.94■□□□□ 0.94
PCDH8O95206 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH8O95206 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.94■□□□□ 0.94
PCDH8O95206 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH8O95206 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH8O95206 AL591742.1-201ENST00000604433 565 ntBASIC20.94■□□□□ 0.94
PCDH8O95206 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH8O95206 OR10C1-204ENST00000622521 1039 ntBASIC20.94■□□□□ 0.94
PCDH8O95206 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH8O95206 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PCDH8O95206 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH8O95206 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH8O95206 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH8O95206 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
PCDH8O95206 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH8O95206 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH8O95206 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH8O95206 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH8O95206 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH8O95206 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.93■□□□□ 0.94
PCDH8O95206 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH8O95206 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
PCDH8O95206 AC016405.3-201ENST00000607710 860 ntBASIC20.93■□□□□ 0.94
PCDH8O95206 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH8O95206 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH8O95206 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH8O95206 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH8O95206 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH8O95206 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH8O95206 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH8O95206 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH8O95206 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH8O95206 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH8O95206 AC243732.1-201ENST00000612648 864 ntBASIC20.92■□□□□ 0.94
PCDH8O95206 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH8O95206 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 MKRN4P-201ENST00000444706 1521 ntBASIC20.92■□□□□ 0.94
PCDH8O95206 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH8O95206 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH8O95206 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms