Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
PCF11O94913 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PCF11O94913 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PCF11O94913 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
PCF11O94913 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
PCF11O94913 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
PCF11O94913 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
PCF11O94913 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC32.97■■■□□ 2.87
PCF11O94913 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
PCF11O94913 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
PCF11O94913 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC32.97■■■□□ 2.87
PCF11O94913 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC32.97■■■□□ 2.87
PCF11O94913 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
PCF11O94913 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC32.96■■■□□ 2.87
PCF11O94913 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC32.96■■■□□ 2.87
PCF11O94913 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
PCF11O94913 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC32.96■■■□□ 2.87
PCF11O94913 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC32.96■■■□□ 2.87
PCF11O94913 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
PCF11O94913 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC32.96■■■□□ 2.87
PCF11O94913 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
PCF11O94913 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
PCF11O94913 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
PCF11O94913 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC32.96■■■□□ 2.87
PCF11O94913 AC245052.3-201ENST00000450182 901 ntBASIC32.96■■■□□ 2.87
PCF11O94913 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC32.96■■■□□ 2.87
PCF11O94913 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
PCF11O94913 FAM21FP-204ENST00000608637 956 ntBASIC32.96■■■□□ 2.87
PCF11O94913 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC32.95■■■□□ 2.86
PCF11O94913 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
PCF11O94913 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC32.95■■■□□ 2.86
PCF11O94913 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
PCF11O94913 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC32.94■■■□□ 2.86
PCF11O94913 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
PCF11O94913 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
PCF11O94913 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC32.94■■■□□ 2.86
PCF11O94913 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC32.94■■■□□ 2.86
PCF11O94913 NARF-205ENST00000412079 1760 ntTSL 5 BASIC32.94■■■□□ 2.86
PCF11O94913 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC32.93■■■□□ 2.86
PCF11O94913 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC32.93■■■□□ 2.86
PCF11O94913 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC32.93■■■□□ 2.86
PCF11O94913 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC32.93■■■□□ 2.86
PCF11O94913 PTPA-214ENST00000423100 988 ntTSL 2 BASIC32.93■■■□□ 2.86
PCF11O94913 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC32.93■■■□□ 2.86
PCF11O94913 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
PCF11O94913 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC32.93■■■□□ 2.86
PCF11O94913 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC32.93■■■□□ 2.86
PCF11O94913 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PCF11O94913 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PCF11O94913 GAS7-202ENST00000396115 929 ntTSL 5 BASIC32.92■■■□□ 2.86
PCF11O94913 AL355472.2-201ENST00000422958 438 ntBASIC32.92■■■□□ 2.86
PCF11O94913 PBX1-209ENST00000485769 834 ntTSL 2 BASIC32.92■■■□□ 2.86
PCF11O94913 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
PCF11O94913 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC32.92■■■□□ 2.86
PCF11O94913 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PCF11O94913 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PCF11O94913 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PCF11O94913 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC32.92■■■□□ 2.86
PCF11O94913 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC32.92■■■□□ 2.86
PCF11O94913 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC32.92■■■□□ 2.86
PCF11O94913 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC32.91■■■□□ 2.86
PCF11O94913 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC32.91■■■□□ 2.86
PCF11O94913 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
PCF11O94913 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
PCF11O94913 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC32.91■■■□□ 2.86
PCF11O94913 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC32.91■■■□□ 2.86
PCF11O94913 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC32.9■■■□□ 2.86
PCF11O94913 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC32.9■■■□□ 2.86
PCF11O94913 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
PCF11O94913 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
PCF11O94913 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC32.9■■■□□ 2.86
PCF11O94913 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC32.9■■■□□ 2.86
PCF11O94913 CASP6-205ENST00000505486 538 ntTSL 4 BASIC32.9■■■□□ 2.86
PCF11O94913 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC32.9■■■□□ 2.86
PCF11O94913 STX5-203ENST00000394690 1568 ntTSL 5 BASIC32.9■■■□□ 2.86
PCF11O94913 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
PCF11O94913 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
PCF11O94913 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
PCF11O94913 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
PCF11O94913 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
PCF11O94913 BET1L-207ENST00000529614 560 ntTSL 5 BASIC32.89■■■□□ 2.86
PCF11O94913 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC32.89■■■□□ 2.86
PCF11O94913 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
PCF11O94913 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
PCF11O94913 SERPINH1P1-201ENST00000419794 1249 ntBASIC32.88■■■□□ 2.85
PCF11O94913 GCSHP5-201ENST00000443090 522 ntBASIC32.88■■■□□ 2.85
PCF11O94913 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC32.88■■■□□ 2.85
PCF11O94913 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC32.88■■■□□ 2.85
PCF11O94913 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
PCF11O94913 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC32.88■■■□□ 2.85
PCF11O94913 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
PCF11O94913 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
PCF11O94913 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC32.88■■■□□ 2.85
PCF11O94913 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC32.87■■■□□ 2.85
PCF11O94913 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC32.87■■■□□ 2.85
PCF11O94913 INO80E-214ENST00000620599 515 ntTSL 2 BASIC32.87■■■□□ 2.85
PCF11O94913 AP006294.2-201ENST00000641667 209 ntBASIC32.87■■■□□ 2.85
PCF11O94913 TERT-206ENST00000508104 2486 ntTSL 5 BASIC32.87■■■□□ 2.85
PCF11O94913 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
PCF11O94913 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms