Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM3O75382 AC092437.1-201ENST00000624794 1048 ntBASIC19.49■□□□□ 0.71
TRIM3O75382 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM3O75382 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM3O75382 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM3O75382 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM3O75382 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM3O75382 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM3O75382 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM3O75382 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM3O75382 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM3O75382 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM3O75382 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM3O75382 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM3O75382 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM3O75382 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM3O75382 KRT19P1-201ENST00000405746 1186 ntBASIC19.48■□□□□ 0.71
TRIM3O75382 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM3O75382 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM3O75382 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM3O75382 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM3O75382 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM3O75382 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM3O75382 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM3O75382 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM3O75382 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM3O75382 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM3O75382 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM3O75382 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM3O75382 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM3O75382 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM3O75382 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.47■□□□□ 0.71
TRIM3O75382 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.47■□□□□ 0.71
TRIM3O75382 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM3O75382 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM3O75382 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM3O75382 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM3O75382 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM3O75382 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM3O75382 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM3O75382 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM3O75382 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM3O75382 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM3O75382 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM3O75382 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM3O75382 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM3O75382 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM3O75382 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM3O75382 AL137784.2-201ENST00000607332 1000 ntBASIC19.45■□□□□ 0.7
TRIM3O75382 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRIM3O75382 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM3O75382 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM3O75382 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRIM3O75382 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM3O75382 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM3O75382 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM3O75382 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM3O75382 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM3O75382 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM3O75382 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM3O75382 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM3O75382 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM3O75382 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM3O75382 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM3O75382 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM3O75382 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM3O75382 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM3O75382 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM3O75382 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM3O75382 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM3O75382 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM3O75382 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM3O75382 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM3O75382 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM3O75382 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM3O75382 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM3O75382 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM3O75382 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms