Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.82■□□□□ 0.6
PFDN1O60925 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN1O60925 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN1O60925 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN1O60925 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN1O60925 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN1O60925 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN1O60925 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.81■□□□□ 0.6
PFDN1O60925 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.81■□□□□ 0.6
PFDN1O60925 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.81■□□□□ 0.6
PFDN1O60925 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN1O60925 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN1O60925 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN1O60925 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN1O60925 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN1O60925 AL359504.2-201ENST00000605506 1601 ntBASIC18.81■□□□□ 0.6
PFDN1O60925 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN1O60925 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.81■□□□□ 0.6
PFDN1O60925 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PFDN1O60925 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PFDN1O60925 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.8■□□□□ 0.6
PFDN1O60925 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
PFDN1O60925 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.8■□□□□ 0.6
PFDN1O60925 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 AC073314.1-201ENST00000568729 2216 ntBASIC18.8■□□□□ 0.6
PFDN1O60925 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.8■□□□□ 0.6
PFDN1O60925 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.8■□□□□ 0.6
PFDN1O60925 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PFDN1O60925 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.8■□□□□ 0.6
PFDN1O60925 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.8■□□□□ 0.6
PFDN1O60925 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PFDN1O60925 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
PFDN1O60925 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PFDN1O60925 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PFDN1O60925 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.79■□□□□ 0.6
PFDN1O60925 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PFDN1O60925 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PFDN1O60925 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PFDN1O60925 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PFDN1O60925 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PFDN1O60925 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PFDN1O60925 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.78■□□□□ 0.6
PFDN1O60925 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PFDN1O60925 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PFDN1O60925 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 SETD8P1-201ENST00000623146 1180 ntBASIC18.78■□□□□ 0.6
PFDN1O60925 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PFDN1O60925 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.78■□□□□ 0.6
PFDN1O60925 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.78■□□□□ 0.6
PFDN1O60925 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
PFDN1O60925 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PFDN1O60925 AL133373.2-201ENST00000623187 2828 ntBASIC18.78■□□□□ 0.6
PFDN1O60925 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.77■□□□□ 0.6
PFDN1O60925 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN1O60925 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN1O60925 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN1O60925 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN1O60925 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PFDN1O60925 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PFDN1O60925 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PFDN1O60925 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PFDN1O60925 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.77■□□□□ 0.59
PFDN1O60925 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PFDN1O60925 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PFDN1O60925 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PFDN1O60925 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PFDN1O60925 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.76■□□□□ 0.59
PFDN1O60925 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PFDN1O60925 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms