Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.83■■□□□ 1.08
CREB3O43889 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CREB3O43889 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CREB3O43889 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3O43889 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.82■■□□□ 1.08
CREB3O43889 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.82■■□□□ 1.08
CREB3O43889 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.82■■□□□ 1.08
CREB3O43889 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CREB3O43889 AC026271.2-201ENST00000428091 497 ntBASIC21.82■■□□□ 1.08
CREB3O43889 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.82■■□□□ 1.08
CREB3O43889 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.82■■□□□ 1.08
CREB3O43889 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.82■■□□□ 1.08
CREB3O43889 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
CREB3O43889 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CREB3O43889 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.82■■□□□ 1.08
CREB3O43889 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.81■■□□□ 1.08
CREB3O43889 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CREB3O43889 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3O43889 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CREB3O43889 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3O43889 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CREB3O43889 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CREB3O43889 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3O43889 AC034268.1-201ENST00000441047 882 ntBASIC21.81■■□□□ 1.08
CREB3O43889 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3O43889 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.81■■□□□ 1.08
CREB3O43889 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.81■■□□□ 1.08
CREB3O43889 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3O43889 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3O43889 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CREB3O43889 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
CREB3O43889 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
CREB3O43889 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CREB3O43889 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.81■■□□□ 1.08
CREB3O43889 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.81■■□□□ 1.08
CREB3O43889 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3O43889 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CREB3O43889 AC004854.2-201ENST00000608450 1441 ntBASIC21.8■■□□□ 1.08
CREB3O43889 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3O43889 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3O43889 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3O43889 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3O43889 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.8■■□□□ 1.08
CREB3O43889 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CREB3O43889 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3O43889 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.8■■□□□ 1.08
CREB3O43889 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.8■■□□□ 1.08
CREB3O43889 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.8■■□□□ 1.08
CREB3O43889 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.8■■□□□ 1.08
CREB3O43889 AC104187.1-201ENST00000607510 612 ntBASIC21.8■■□□□ 1.08
CREB3O43889 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3O43889 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CREB3O43889 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3O43889 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CREB3O43889 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3O43889 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.79■■□□□ 1.08
CREB3O43889 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3O43889 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.79■■□□□ 1.08
CREB3O43889 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CREB3O43889 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3O43889 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.79■■□□□ 1.08
CREB3O43889 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.79■■□□□ 1.08
CREB3O43889 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.79■■□□□ 1.08
CREB3O43889 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3O43889 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3O43889 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3O43889 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3O43889 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3O43889 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3O43889 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.78■■□□□ 1.08
CREB3O43889 AL137060.1-201ENST00000618151 2648 ntBASIC21.78■■□□□ 1.08
CREB3O43889 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3O43889 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3O43889 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3O43889 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CREB3O43889 MIR935-201ENST00000401179 91 ntBASIC21.78■■□□□ 1.08
CREB3O43889 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CREB3O43889 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.78■■□□□ 1.08
CREB3O43889 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3O43889 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.78■■□□□ 1.08
CREB3O43889 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3O43889 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.78■■□□□ 1.08
CREB3O43889 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3O43889 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CREB3O43889 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CREB3O43889 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CREB3O43889 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.77■■□□□ 1.08
CREB3O43889 AP004607.4-201ENST00000530158 1459 ntBASIC21.77■■□□□ 1.08
CREB3O43889 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CREB3O43889 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3O43889 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.77■■□□□ 1.08
CREB3O43889 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.77■■□□□ 1.08
CREB3O43889 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3O43889 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.77■■□□□ 1.08
CREB3O43889 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.77■■□□□ 1.08
CREB3O43889 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.77■■□□□ 1.08
CREB3O43889 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.77■■□□□ 1.08
CREB3O43889 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.77■■□□□ 1.08
CREB3O43889 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CREB3O43889 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms