Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC3O15379 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HDAC3O15379 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HDAC3O15379 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC3O15379 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC3O15379 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.38■□□□□ 0.85
HDAC3O15379 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.38■□□□□ 0.85
HDAC3O15379 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC3O15379 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HDAC3O15379 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC3O15379 SERBP1P1-201ENST00000396021 1160 ntBASIC20.38■□□□□ 0.85
HDAC3O15379 SLC47A1P1-202ENST00000449666 945 ntBASIC20.38■□□□□ 0.85
HDAC3O15379 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.38■□□□□ 0.85
HDAC3O15379 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.38■□□□□ 0.85
HDAC3O15379 AC136469.2-201ENST00000623944 1028 ntBASIC20.38■□□□□ 0.85
HDAC3O15379 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC3O15379 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HDAC3O15379 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.38■□□□□ 0.85
HDAC3O15379 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
HDAC3O15379 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HDAC3O15379 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HDAC3O15379 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC3O15379 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC3O15379 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HDAC3O15379 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC3O15379 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC3O15379 AC121338.2-201ENST00000622535 1744 ntBASIC20.37■□□□□ 0.85
HDAC3O15379 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC3O15379 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.37■□□□□ 0.85
HDAC3O15379 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC3O15379 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
HDAC3O15379 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC3O15379 SYT6-210ENST00000641643 1587 ntBASIC20.37■□□□□ 0.85
HDAC3O15379 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HDAC3O15379 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.37■□□□□ 0.85
HDAC3O15379 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HDAC3O15379 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HDAC3O15379 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
HDAC3O15379 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HDAC3O15379 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HDAC3O15379 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
HDAC3O15379 DUX4L19-201ENST00000557448 1267 ntBASIC20.36■□□□□ 0.85
HDAC3O15379 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.36■□□□□ 0.85
HDAC3O15379 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HDAC3O15379 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HDAC3O15379 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HDAC3O15379 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HDAC3O15379 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HDAC3O15379 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.36■□□□□ 0.85
HDAC3O15379 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.35■□□□□ 0.85
HDAC3O15379 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HDAC3O15379 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HDAC3O15379 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.35■□□□□ 0.85
HDAC3O15379 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 AC027702.1-201ENST00000563810 1770 ntBASIC20.35■□□□□ 0.85
HDAC3O15379 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HDAC3O15379 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HDAC3O15379 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HDAC3O15379 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HDAC3O15379 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HDAC3O15379 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC3O15379 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC3O15379 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
HDAC3O15379 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC3O15379 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.34■□□□□ 0.85
HDAC3O15379 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC3O15379 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.34■□□□□ 0.85
HDAC3O15379 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
HDAC3O15379 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.34■□□□□ 0.85
HDAC3O15379 AC011298.3-201ENST00000615796 283 ntBASIC20.34■□□□□ 0.85
HDAC3O15379 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC3O15379 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC3O15379 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC3O15379 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDAC3O15379 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.34■□□□□ 0.85
HDAC3O15379 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.34■□□□□ 0.85
HDAC3O15379 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.34■□□□□ 0.85
HDAC3O15379 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC3O15379 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.33■□□□□ 0.85
HDAC3O15379 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC3O15379 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC3O15379 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HDAC3O15379 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
HDAC3O15379 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC3O15379 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC3O15379 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC3O15379 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC3O15379 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HDAC3O15379 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.33■□□□□ 0.85
HDAC3O15379 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.33■□□□□ 0.85
HDAC3O15379 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms