Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDH17O14917 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDH17O14917 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDH17O14917 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.98■□□□□ 0.79
PCDH17O14917 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDH17O14917 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDH17O14917 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDH17O14917 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH17O14917 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH17O14917 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH17O14917 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDH17O14917 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDH17O14917 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH17O14917 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PCDH17O14917 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PCDH17O14917 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.97■□□□□ 0.79
PCDH17O14917 AC104187.1-201ENST00000607510 612 ntBASIC19.97■□□□□ 0.79
PCDH17O14917 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH17O14917 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH17O14917 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDH17O14917 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDH17O14917 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH17O14917 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PCDH17O14917 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH17O14917 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH17O14917 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH17O14917 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH17O14917 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
PCDH17O14917 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH17O14917 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH17O14917 AC138907.5-202ENST00000569484 235 ntBASIC19.96■□□□□ 0.79
PCDH17O14917 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.96■□□□□ 0.79
PCDH17O14917 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH17O14917 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDH17O14917 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH17O14917 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH17O14917 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
PCDH17O14917 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH17O14917 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
PCDH17O14917 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDH17O14917 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH17O14917 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.95■□□□□ 0.78
PCDH17O14917 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDH17O14917 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH17O14917 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH17O14917 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.95■□□□□ 0.78
PCDH17O14917 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDH17O14917 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH17O14917 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH17O14917 AC053503.5-201ENST00000601508 636 ntBASIC19.95■□□□□ 0.78
PCDH17O14917 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH17O14917 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH17O14917 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH17O14917 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH17O14917 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH17O14917 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDH17O14917 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH17O14917 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH17O14917 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDH17O14917 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH17O14917 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
PCDH17O14917 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH17O14917 AC080038.1-201ENST00000611274 1154 ntBASIC19.94■□□□□ 0.78
PCDH17O14917 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDH17O14917 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH17O14917 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH17O14917 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PCDH17O14917 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH17O14917 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH17O14917 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH17O14917 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 AC010141.2-201ENST00000452426 721 ntBASIC19.93■□□□□ 0.78
PCDH17O14917 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH17O14917 EEF1DP3-203ENST00000566025 782 ntBASIC19.93■□□□□ 0.78
PCDH17O14917 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDH17O14917 AP001160.3-201ENST00000601484 763 ntBASIC19.93■□□□□ 0.78
PCDH17O14917 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDH17O14917 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PCDH17O14917 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH17O14917 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms