Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF11O14788 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TNFSF11O14788 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.86■□□□□ 0.61
TNFSF11O14788 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.86■□□□□ 0.61
TNFSF11O14788 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TNFSF11O14788 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.85■□□□□ 0.61
TNFSF11O14788 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFSF11O14788 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TNFSF11O14788 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.85■□□□□ 0.61
TNFSF11O14788 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.85■□□□□ 0.61
TNFSF11O14788 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.85■□□□□ 0.61
TNFSF11O14788 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 AC011767.1-201ENST00000617410 1153 ntBASIC18.85■□□□□ 0.61
TNFSF11O14788 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.85■□□□□ 0.61
TNFSF11O14788 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TNFSF11O14788 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF11O14788 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF11O14788 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF11O14788 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF11O14788 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF11O14788 PKD1P6-201ENST00000343738 4769 ntBASIC18.84■□□□□ 0.61
TNFSF11O14788 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.84■□□□□ 0.61
TNFSF11O14788 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
TNFSF11O14788 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF11O14788 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFSF11O14788 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TNFSF11O14788 MFSD11-216ENST00000590393 1141 ntBASIC18.84■□□□□ 0.61
TNFSF11O14788 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF11O14788 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFSF11O14788 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.84■□□□□ 0.61
TNFSF11O14788 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
TNFSF11O14788 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
TNFSF11O14788 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF11O14788 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFSF11O14788 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TNFSF11O14788 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TNFSF11O14788 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF11O14788 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TNFSF11O14788 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF11O14788 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TNFSF11O14788 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TNFSF11O14788 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFSF11O14788 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFSF11O14788 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF11O14788 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.83■□□□□ 0.61
TNFSF11O14788 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF11O14788 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF11O14788 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF11O14788 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF11O14788 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF11O14788 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF11O14788 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.83■□□□□ 0.6
TNFSF11O14788 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF11O14788 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF11O14788 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF11O14788 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF11O14788 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF11O14788 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TNFSF11O14788 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF11O14788 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.83■□□□□ 0.6
TNFSF11O14788 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF11O14788 KRT16P2-201ENST00000414673 1423 ntBASIC18.83■□□□□ 0.6
TNFSF11O14788 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TNFSF11O14788 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TNFSF11O14788 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.82■□□□□ 0.6
TNFSF11O14788 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.82■□□□□ 0.6
TNFSF11O14788 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF11O14788 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF11O14788 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF11O14788 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF11O14788 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TNFSF11O14788 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.82■□□□□ 0.6
TNFSF11O14788 AC080038.1-201ENST00000611274 1154 ntBASIC18.82■□□□□ 0.6
TNFSF11O14788 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF11O14788 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFSF11O14788 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF11O14788 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF11O14788 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF11O14788 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
TNFSF11O14788 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF11O14788 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF11O14788 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.82■□□□□ 0.6
TNFSF11O14788 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF11O14788 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF11O14788 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms