Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.17■□□□□ 0.98
AP3B1O00203 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3B1O00203 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
AP3B1O00203 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.16■□□□□ 0.98
AP3B1O00203 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP3B1O00203 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP3B1O00203 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.16■□□□□ 0.98
AP3B1O00203 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
AP3B1O00203 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
AP3B1O00203 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP3B1O00203 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP3B1O00203 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.16■□□□□ 0.98
AP3B1O00203 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
AP3B1O00203 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.16■□□□□ 0.98
AP3B1O00203 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP3B1O00203 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AP3B1O00203 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
AP3B1O00203 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
AP3B1O00203 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP3B1O00203 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP3B1O00203 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
AP3B1O00203 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP3B1O00203 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
AP3B1O00203 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP3B1O00203 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP3B1O00203 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.15■□□□□ 0.98
AP3B1O00203 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.15■□□□□ 0.98
AP3B1O00203 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AP3B1O00203 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AP3B1O00203 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.15■□□□□ 0.98
AP3B1O00203 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP3B1O00203 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AP3B1O00203 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.14■□□□□ 0.98
AP3B1O00203 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP3B1O00203 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP3B1O00203 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP3B1O00203 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.14■□□□□ 0.97
AP3B1O00203 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.14■□□□□ 0.97
AP3B1O00203 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.14■□□□□ 0.97
AP3B1O00203 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.14■□□□□ 0.97
AP3B1O00203 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3B1O00203 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.14■□□□□ 0.97
AP3B1O00203 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP3B1O00203 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
AP3B1O00203 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AP3B1O00203 AP004607.4-201ENST00000530158 1459 ntBASIC21.13■□□□□ 0.97
AP3B1O00203 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.13■□□□□ 0.97
AP3B1O00203 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3B1O00203 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
AP3B1O00203 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.13■□□□□ 0.97
AP3B1O00203 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
AP3B1O00203 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3B1O00203 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
AP3B1O00203 POU5F1P4-201ENST00000413175 1085 ntBASIC21.13■□□□□ 0.97
AP3B1O00203 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.13■□□□□ 0.97
AP3B1O00203 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3B1O00203 AC008175.2-201ENST00000612840 297 ntBASIC21.13■□□□□ 0.97
AP3B1O00203 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.13■□□□□ 0.97
AP3B1O00203 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3B1O00203 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
AP3B1O00203 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
AP3B1O00203 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AP3B1O00203 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
AP3B1O00203 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP3B1O00203 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP3B1O00203 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
AP3B1O00203 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP3B1O00203 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
AP3B1O00203 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP3B1O00203 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP3B1O00203 AC079140.4-201ENST00000507448 529 ntBASIC21.12■□□□□ 0.97
AP3B1O00203 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP3B1O00203 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.12■□□□□ 0.97
AP3B1O00203 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AP3B1O00203 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AP3B1O00203 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.11■□□□□ 0.97
AP3B1O00203 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
AP3B1O00203 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
AP3B1O00203 AC027612.3-201ENST00000413684 1047 ntBASIC21.11■□□□□ 0.97
AP3B1O00203 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
AP3B1O00203 KRT87P-202ENST00000534226 1464 ntBASIC21.11■□□□□ 0.97
AP3B1O00203 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.11■□□□□ 0.97
AP3B1O00203 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
AP3B1O00203 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3B1O00203 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AP3B1O00203 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
AP3B1O00203 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.1■□□□□ 0.97
AP3B1O00203 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms