Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.74■□□□□ 0.27
CGB1A6NKQ9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CGB1A6NKQ9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.73■□□□□ 0.27
CGB1A6NKQ9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.73■□□□□ 0.27
CGB1A6NKQ9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.72■□□□□ 0.27
CGB1A6NKQ9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CGB1A6NKQ9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
CGB1A6NKQ9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CGB1A6NKQ9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CGB1A6NKQ9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CGB1A6NKQ9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CGB1A6NKQ9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms