Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEM88BA6NKF7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 AC239809.2-201ENST00000415381 517 ntBASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 AC110285.5-201ENST00000611501 352 ntBASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
TMEM88BA6NKF7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 HES2-205ENST00000487437 968 ntTSL 3 BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.74■■□□□ 1.55
TMEM88BA6NKF7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 MMP23A-201ENST00000234610 1017 ntBASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 KRT18P68-201ENST00000392293 1000 ntBASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 CDV3P1-201ENST00000471403 739 ntBASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.73■■□□□ 1.55
TMEM88BA6NKF7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.72■■□□□ 1.55
TMEM88BA6NKF7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
TMEM88BA6NKF7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.72■■□□□ 1.55
TMEM88BA6NKF7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC24.72■■□□□ 1.55
TMEM88BA6NKF7 RARRES2P10-201ENST00000564312 460 ntBASIC24.72■■□□□ 1.55
TMEM88BA6NKF7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
TMEM88BA6NKF7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TMEM88BA6NKF7 AC061975.6-201ENST00000579045 1553 ntBASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 AC091799.1-201ENST00000422823 811 ntBASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
TMEM88BA6NKF7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
TMEM88BA6NKF7 LINC00526-201ENST00000581067 1875 ntBASIC24.7■■□□□ 1.55
TMEM88BA6NKF7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
TMEM88BA6NKF7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 LINC01960-201ENST00000563759 1884 ntBASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TMEM88BA6NKF7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
TMEM88BA6NKF7 AC005363.2-201ENST00000618631 242 ntBASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms