Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 AC006128.1-201ENST00000624704 1661 ntBASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 AC003102.1-202ENST00000563394 1796 ntBASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MEIS3P1A6NDR6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 PLK5-205ENST00000642079 1969 ntBASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MEIS3P1A6NDR6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 AC006455.2-201ENST00000429931 906 ntBASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 pRNA.6-201ENST00000610482 90 ntBASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 pRNA.5-201ENST00000612139 90 ntBASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 pRNA.11-201ENST00000618423 90 ntBASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 pRNA.13-201ENST00000619112 90 ntBASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.91■□□□□ 0.46
MEIS3P1A6NDR6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 KRT125P-201ENST00000546827 989 ntBASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 Z92544.1-202ENST00000571933 1220 ntBASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 AC010997.5-201ENST00000609182 354 ntBASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MEIS3P1A6NDR6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms