Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC005837.3-201ENST00000612163 286 ntBASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
TRIM49BA6NDI0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 PKD1P6-201ENST00000343738 4769 ntBASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.12■■□□□ 1.29
TRIM49BA6NDI0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIM49BA6NDI0 AC073130.3-201ENST00000624389 2278 ntBASIC23.11■■□□□ 1.29
TRIM49BA6NDI0 PLK5-205ENST00000642079 1969 ntBASIC23.11■■□□□ 1.29
TRIM49BA6NDI0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
TRIM49BA6NDI0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIM49BA6NDI0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.11■■□□□ 1.29
TRIM49BA6NDI0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM49BA6NDI0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.11■■□□□ 1.29
TRIM49BA6NDI0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TRIM49BA6NDI0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TRIM49BA6NDI0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 AC105265.2-201ENST00000467189 838 ntBASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 AL354811.1-201ENST00000610286 706 ntBASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRIM49BA6NDI0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRIM49BA6NDI0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 EEF1DP3-203ENST00000566025 782 ntBASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRIM49BA6NDI0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM49BA6NDI0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM49BA6NDI0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TRIM49BA6NDI0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 MIR638-201ENST00000385237 100 ntBASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 AL358852.1-201ENST00000623174 1268 ntBASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
TRIM49BA6NDI0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.06■■□□□ 1.28
TRIM49BA6NDI0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM49BA6NDI0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM49BA6NDI0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM49BA6NDI0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.06■■□□□ 1.28
TRIM49BA6NDI0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.06■■□□□ 1.28
TRIM49BA6NDI0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM49BA6NDI0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
TRIM49BA6NDI0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRIM49BA6NDI0 AC061975.6-201ENST00000579045 1553 ntBASIC23.06■■□□□ 1.28
TRIM49BA6NDI0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 LINC01006-201ENST00000333319 2292 ntBASIC23.05■■□□□ 1.28
TRIM49BA6NDI0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms