Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SYCE3A1L190 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SYCE3A1L190 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SYCE3A1L190 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SYCE3A1L190 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SYCE3A1L190 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.86■■□□□ 1.41
SYCE3A1L190 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SYCE3A1L190 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.86■■□□□ 1.41
SYCE3A1L190 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.86■■□□□ 1.41
SYCE3A1L190 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
SYCE3A1L190 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SYCE3A1L190 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.85■■□□□ 1.41
SYCE3A1L190 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.85■■□□□ 1.41
SYCE3A1L190 AC068587.7-201ENST00000641602 218 ntBASIC23.85■■□□□ 1.41
SYCE3A1L190 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SYCE3A1L190 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SYCE3A1L190 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE3A1L190 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE3A1L190 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.84■■□□□ 1.41
SYCE3A1L190 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE3A1L190 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE3A1L190 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.84■■□□□ 1.41
SYCE3A1L190 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SYCE3A1L190 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.84■■□□□ 1.41
SYCE3A1L190 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
SYCE3A1L190 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.84■■□□□ 1.41
SYCE3A1L190 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.84■■□□□ 1.41
SYCE3A1L190 AC241377.3-202ENST00000626088 1088 ntBASIC23.84■■□□□ 1.41
SYCE3A1L190 AC241585.3-202ENST00000628937 1088 ntBASIC23.84■■□□□ 1.41
SYCE3A1L190 AC245100.8-202ENST00000629247 1058 ntBASIC23.84■■□□□ 1.41
SYCE3A1L190 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE3A1L190 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.84■■□□□ 1.41
SYCE3A1L190 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SYCE3A1L190 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
SYCE3A1L190 AC020907.5-201ENST00000624372 1936 ntBASIC23.84■■□□□ 1.41
SYCE3A1L190 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SYCE3A1L190 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SYCE3A1L190 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SYCE3A1L190 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.84■■□□□ 1.41
SYCE3A1L190 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.83■■□□□ 1.41
SYCE3A1L190 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
SYCE3A1L190 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.83■■□□□ 1.41
SYCE3A1L190 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SYCE3A1L190 AL117332.1-201ENST00000622628 974 ntBASIC23.83■■□□□ 1.41
SYCE3A1L190 AC012354.3-201ENST00000623734 483 ntBASIC23.83■■□□□ 1.41
SYCE3A1L190 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.83■■□□□ 1.41
SYCE3A1L190 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.83■■□□□ 1.41
SYCE3A1L190 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SYCE3A1L190 AP004607.7-201ENST00000527152 1677 ntBASIC23.83■■□□□ 1.4
SYCE3A1L190 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE3A1L190 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE3A1L190 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.82■■□□□ 1.4
SYCE3A1L190 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE3A1L190 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE3A1L190 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.82■■□□□ 1.4
SYCE3A1L190 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.82■■□□□ 1.4
SYCE3A1L190 AC010997.5-201ENST00000609182 354 ntBASIC23.82■■□□□ 1.4
SYCE3A1L190 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE3A1L190 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.82■■□□□ 1.4
SYCE3A1L190 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYCE3A1L190 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.82■■□□□ 1.4
SYCE3A1L190 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.81■■□□□ 1.4
SYCE3A1L190 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SYCE3A1L190 AC010141.3-201ENST00000456659 717 ntBASIC23.81■■□□□ 1.4
SYCE3A1L190 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.81■■□□□ 1.4
SYCE3A1L190 AL034346.1-201ENST00000568244 1277 ntBASIC23.81■■□□□ 1.4
SYCE3A1L190 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
SYCE3A1L190 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SYCE3A1L190 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE3A1L190 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.8■■□□□ 1.4
SYCE3A1L190 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SYCE3A1L190 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE3A1L190 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE3A1L190 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.8■■□□□ 1.4
SYCE3A1L190 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SYCE3A1L190 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.8■■□□□ 1.4
SYCE3A1L190 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.8■■□□□ 1.4
SYCE3A1L190 AC087239.1-201ENST00000622671 572 ntBASIC23.8■■□□□ 1.4
SYCE3A1L190 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.8■■□□□ 1.4
SYCE3A1L190 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE3A1L190 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYCE3A1L190 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.79■■□□□ 1.4
SYCE3A1L190 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE3A1L190 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.79■■□□□ 1.4
SYCE3A1L190 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE3A1L190 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE3A1L190 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE3A1L190 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.79■■□□□ 1.4
SYCE3A1L190 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYCE3A1L190 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms