Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPVL3A0A0U1RRI6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CENPVL3A0A0U1RRI6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CENPVL3A0A0U1RRI6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.02■□□□□ 0.32
CENPVL3A0A0U1RRI6 AC069236.1-201ENST00000604339 616 ntBASIC17.02■□□□□ 0.32
CENPVL3A0A0U1RRI6 AL591742.1-201ENST00000604433 565 ntBASIC17.02■□□□□ 0.32
CENPVL3A0A0U1RRI6 OR10C1-204ENST00000622521 1039 ntBASIC17.02■□□□□ 0.32
CENPVL3A0A0U1RRI6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.02■□□□□ 0.32
CENPVL3A0A0U1RRI6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.02■□□□□ 0.32
CENPVL3A0A0U1RRI6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPVL3A0A0U1RRI6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CENPVL3A0A0U1RRI6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.02■□□□□ 0.31
CENPVL3A0A0U1RRI6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.02■□□□□ 0.31
CENPVL3A0A0U1RRI6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.02■□□□□ 0.31
CENPVL3A0A0U1RRI6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 AL138781.1-201ENST00000566567 1274 ntBASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CENPVL3A0A0U1RRI6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 AL162412.1-201ENST00000567129 965 ntBASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CENPVL3A0A0U1RRI6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 AL512625.2-201ENST00000417533 625 ntBASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 AC016405.3-201ENST00000607710 860 ntBASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CENPVL3A0A0U1RRI6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 MKRN4P-201ENST00000444706 1521 ntBASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 AC245052.3-201ENST00000450182 901 ntBASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 AC093787.1-201ENST00000450396 207 ntBASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CENPVL3A0A0U1RRI6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms