Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 AC092368.3-202ENST00000574180 1591 ntBASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC163A0A0D9SF12 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC163A0A0D9SF12 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC163A0A0D9SF12 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC163A0A0D9SF12 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.89■□□□□ 0.94
CCDC163A0A0D9SF12 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
CCDC163A0A0D9SF12 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
CCDC163A0A0D9SF12 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 Z99916.2-201ENST00000604037 246 ntBASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 AC087742.1-201ENST00000575880 1738 ntBASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC163A0A0D9SF12 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 KRT18P68-201ENST00000392293 1000 ntBASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 FAM210CP-201ENST00000445714 574 ntBASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC163A0A0D9SF12 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 REXO1L12P-201ENST00000622156 912 ntBASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC163A0A0D9SF12 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 ECEL1P3-201ENST00000427961 737 ntBASIC20.86■□□□□ 0.93
CCDC163A0A0D9SF12 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms