Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IGKV3D-20A0A0C4DH25 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MIR3621-201ENST00000580529 85 ntBASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 AC092171.4-201ENST00000609130 632 ntBASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IGKV3D-20A0A0C4DH25 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SRD5A1P1-201ENST00000442297 786 ntBASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
IGKV3D-20A0A0C4DH25 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
IGKV3D-20A0A0C4DH25 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
IGKV3D-20A0A0C4DH25 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
IGKV3D-20A0A0C4DH25 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.52■□□□□ 0.08
IGKV3D-20A0A0C4DH25 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.52■□□□□ 0.08
IGKV3D-20A0A0C4DH25 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
IGKV3D-20A0A0C4DH25 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms