Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 ESRRAP1-201ENST00000400596 1257 ntBASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.03■□□□□ 0.64
TRAV17A0A0B4J275 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV17A0A0B4J275 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TRAV17A0A0B4J275 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRAV17A0A0B4J275 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 C1orf229-201ENST00000623686 2258 ntBASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 PRORSD1P-201ENST00000295112 541 ntBASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRAV17A0A0B4J275 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 CYP2T3P-201ENST00000601990 817 ntBASIC19■□□□□ 0.63
TRAV17A0A0B4J275 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV17A0A0B4J275 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 AL589743.5-201ENST00000616611 1050 ntBASIC18.99■□□□□ 0.63
TRAV17A0A0B4J275 AC010542.4-201ENST00000563151 1910 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms