Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 GABARAPL3-202ENST00000624044 1851 ntBASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 AP005212.1-201ENST00000581547 1997 ntBASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV5A0A0B4J249 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 SRD5A1P1-201ENST00000442297 786 ntBASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV5A0A0B4J249 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV5A0A0B4J249 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 AP006587.3-201ENST00000525742 1516 ntBASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV5A0A0B4J249 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 MIR3621-201ENST00000580529 85 ntBASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV5A0A0B4J249 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms