Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 AC004687.1-201ENST00000579003 1625 ntBASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 AC006128.1-201ENST00000624704 1661 ntBASIC13.85□□□□□ -0.19
TRAV13-2A0A0B4J235 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 AFG3L1P-217ENST00000557444 2447 ntBASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV13-2A0A0B4J235 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV13-2A0A0B4J235 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV13-2A0A0B4J235 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV13-2A0A0B4J235 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV13-2A0A0B4J235 AC073314.1-201ENST00000568729 2216 ntBASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 AL020996.1-203ENST00000536896 2307 ntBASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 AF131216.4-201ENST00000638924 1588 ntBASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 AC087289.5-201ENST00000586076 3175 ntBASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV13-2A0A0B4J235 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 BX323043.1-201ENST00000641006 1765 ntBASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 AL592293.1-201ENST00000502889 1188 ntBASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV13-2A0A0B4J235 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms