Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV6-7A0A0A0MS04 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 AC131281.2-201ENST00000520478 145 ntBASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV6-7A0A0A0MS04 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.52■□□□□ 0.39
TRBV6-7A0A0A0MS04 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV6-7A0A0A0MS04 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV6-7A0A0A0MS04 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV6-7A0A0A0MS04 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV6-7A0A0A0MS04 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.52■□□□□ 0.39
TRBV6-7A0A0A0MS04 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.51■□□□□ 0.39
TRBV6-7A0A0A0MS04 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV6-7A0A0A0MS04 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 SMUG1P1-201ENST00000590640 811 ntBASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.49■□□□□ 0.39
TRBV6-7A0A0A0MS04 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms