Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGKV2-28A0A075B6P5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.84□□□□□ -0.19
IGKV2-28A0A075B6P5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
IGKV2-28A0A075B6P5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.83□□□□□ -0.19
IGKV2-28A0A075B6P5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
IGKV2-28A0A075B6P5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 HES6-204ENST00000409182 863 ntTSL 2 BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
IGKV2-28A0A075B6P5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 RARRES2P1-201ENST00000474487 481 ntBASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
IGKV2-28A0A075B6P5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
IGKV2-28A0A075B6P5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 AC087289.5-201ENST00000586076 3175 ntBASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
IGKV2-28A0A075B6P5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
IGKV2-28A0A075B6P5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms