Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
PCDHAC2Q9Y5I4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PCDHAC2Q9Y5I4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PCDHAC2Q9Y5I4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC32.38■■■□□ 2.77
PCDHAC2Q9Y5I4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
PCDHAC2Q9Y5I4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.38■■■□□ 2.77
PCDHAC2Q9Y5I4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.38■■■□□ 2.77
PCDHAC2Q9Y5I4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.37■■■□□ 2.77
PCDHAC2Q9Y5I4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC32.37■■■□□ 2.77
PCDHAC2Q9Y5I4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
PCDHAC2Q9Y5I4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.36■■■□□ 2.77
PCDHAC2Q9Y5I4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PCDHAC2Q9Y5I4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PCDHAC2Q9Y5I4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PCDHAC2Q9Y5I4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
PCDHAC2Q9Y5I4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PCDHAC2Q9Y5I4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PCDHAC2Q9Y5I4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
PCDHAC2Q9Y5I4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PCDHAC2Q9Y5I4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PCDHAC2Q9Y5I4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
PCDHAC2Q9Y5I4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.29■■■□□ 2.76
PCDHAC2Q9Y5I4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.29■■■□□ 2.76
PCDHAC2Q9Y5I4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PCDHAC2Q9Y5I4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PCDHAC2Q9Y5I4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
PCDHAC2Q9Y5I4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.28■■■□□ 2.76
PCDHAC2Q9Y5I4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
PCDHAC2Q9Y5I4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PCDHAC2Q9Y5I4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PCDHAC2Q9Y5I4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.27■■■□□ 2.76
PCDHAC2Q9Y5I4 AC108673.1-201ENST00000510422 1159 ntBASIC32.27■■■□□ 2.76
PCDHAC2Q9Y5I4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC32.26■■■□□ 2.76
PCDHAC2Q9Y5I4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PCDHAC2Q9Y5I4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
PCDHAC2Q9Y5I4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC32.24■■■□□ 2.75
PCDHAC2Q9Y5I4 MIR4449-201ENST00000578365 66 ntBASIC32.24■■■□□ 2.75
PCDHAC2Q9Y5I4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
PCDHAC2Q9Y5I4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
PCDHAC2Q9Y5I4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.22■■■□□ 2.75
PCDHAC2Q9Y5I4 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PCDHAC2Q9Y5I4 MIR639-201ENST00000384974 98 ntBASIC32.21■■■□□ 2.75
PCDHAC2Q9Y5I4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.21■■■□□ 2.75
PCDHAC2Q9Y5I4 AC016575.1-201ENST00000607026 382 ntBASIC32.21■■■□□ 2.75
PCDHAC2Q9Y5I4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.2■■■□□ 2.75
PCDHAC2Q9Y5I4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.19■■■□□ 2.74
PCDHAC2Q9Y5I4 MIR3648-2-201ENST00000581792 180 ntBASIC32.19■■■□□ 2.74
PCDHAC2Q9Y5I4 MIR3648-1-201ENST00000615959 180 ntBASIC32.19■■■□□ 2.74
PCDHAC2Q9Y5I4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PCDHAC2Q9Y5I4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
PCDHAC2Q9Y5I4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PCDHAC2Q9Y5I4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.17■■■□□ 2.74
PCDHAC2Q9Y5I4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.17■■■□□ 2.74
PCDHAC2Q9Y5I4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
PCDHAC2Q9Y5I4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.15■■■□□ 2.74
PCDHAC2Q9Y5I4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PCDHAC2Q9Y5I4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
PCDHAC2Q9Y5I4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC32.14■■■□□ 2.74
PCDHAC2Q9Y5I4 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32.14■■■□□ 2.74
PCDHAC2Q9Y5I4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PCDHAC2Q9Y5I4 CR559946.2-201ENST00000623684 991 ntBASIC32.13■■■□□ 2.73
PCDHAC2Q9Y5I4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PCDHAC2Q9Y5I4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PCDHAC2Q9Y5I4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
PCDHAC2Q9Y5I4 DUX4L11-201ENST00000611504 1267 ntBASIC32.12■■■□□ 2.73
PCDHAC2Q9Y5I4 DUX4L12-201ENST00000614593 1267 ntBASIC32.12■■■□□ 2.73
PCDHAC2Q9Y5I4 DUX4L14-201ENST00000621227 1267 ntBASIC32.12■■■□□ 2.73
PCDHAC2Q9Y5I4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
PCDHAC2Q9Y5I4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PCDHAC2Q9Y5I4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC32.09■■■□□ 2.73
PCDHAC2Q9Y5I4 AC120057.4-201ENST00000624722 1615 ntBASIC32.08■■■□□ 2.73
PCDHAC2Q9Y5I4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.08■■■□□ 2.73
PCDHAC2Q9Y5I4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
PCDHAC2Q9Y5I4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PCDHAC2Q9Y5I4 LINC01971-201ENST00000617888 1048 ntBASIC32.05■■■□□ 2.72
PCDHAC2Q9Y5I4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
PCDHAC2Q9Y5I4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
PCDHAC2Q9Y5I4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
PCDHAC2Q9Y5I4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
PCDHAC2Q9Y5I4 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PCDHAC2Q9Y5I4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
PCDHAC2Q9Y5I4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.99■■■□□ 2.71
PCDHAC2Q9Y5I4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.99■■■□□ 2.71
PCDHAC2Q9Y5I4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCDHAC2Q9Y5I4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.98■■■□□ 2.71
PCDHAC2Q9Y5I4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.97■■■□□ 2.71
PCDHAC2Q9Y5I4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
PCDHAC2Q9Y5I4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PCDHAC2Q9Y5I4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
PCDHAC2Q9Y5I4 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
PCDHAC2Q9Y5I4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.96■■■□□ 2.71
PCDHAC2Q9Y5I4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PCDHAC2Q9Y5I4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.95■■■□□ 2.71
PCDHAC2Q9Y5I4 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PCDHAC2Q9Y5I4 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
PCDHAC2Q9Y5I4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PCDHAC2Q9Y5I4 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
PCDHAC2Q9Y5I4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.92■■■□□ 2.7
PCDHAC2Q9Y5I4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PCDHAC2Q9Y5I4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms