Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 AC108673.1-201ENST00000510422 1159 ntBASIC27.83■■■□□ 2.05
BRD9Q9H8M2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
BRD9Q9H8M2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC27.81■■■□□ 2.04
BRD9Q9H8M2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
BRD9Q9H8M2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
BRD9Q9H8M2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.8■■■□□ 2.04
BRD9Q9H8M2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
BRD9Q9H8M2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.8■■■□□ 2.04
BRD9Q9H8M2 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
BRD9Q9H8M2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC27.78■■■□□ 2.04
BRD9Q9H8M2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
BRD9Q9H8M2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
BRD9Q9H8M2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.77■■■□□ 2.04
BRD9Q9H8M2 MIR6090-201ENST00000622481 60 ntBASIC27.77■■■□□ 2.04
BRD9Q9H8M2 MIR4449-201ENST00000578365 66 ntBASIC27.76■■■□□ 2.03
BRD9Q9H8M2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
BRD9Q9H8M2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
BRD9Q9H8M2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
BRD9Q9H8M2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BRD9Q9H8M2 MIR639-201ENST00000384974 98 ntBASIC27.75■■■□□ 2.03
BRD9Q9H8M2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.75■■■□□ 2.03
BRD9Q9H8M2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
BRD9Q9H8M2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC27.75■■■□□ 2.03
BRD9Q9H8M2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
BRD9Q9H8M2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
BRD9Q9H8M2 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
BRD9Q9H8M2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.72■■■□□ 2.03
BRD9Q9H8M2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.71■■■□□ 2.03
BRD9Q9H8M2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.71■■■□□ 2.03
BRD9Q9H8M2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.71■■■□□ 2.03
BRD9Q9H8M2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
BRD9Q9H8M2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
BRD9Q9H8M2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
BRD9Q9H8M2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
BRD9Q9H8M2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
BRD9Q9H8M2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.69■■■□□ 2.02
BRD9Q9H8M2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC27.69■■■□□ 2.02
BRD9Q9H8M2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
BRD9Q9H8M2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
BRD9Q9H8M2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.67■■■□□ 2.02
BRD9Q9H8M2 MIR3648-2-201ENST00000581792 180 ntBASIC27.67■■■□□ 2.02
BRD9Q9H8M2 MIR3648-1-201ENST00000615959 180 ntBASIC27.67■■■□□ 2.02
BRD9Q9H8M2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
BRD9Q9H8M2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
BRD9Q9H8M2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.66■■■□□ 2.02
BRD9Q9H8M2 AC016575.1-201ENST00000607026 382 ntBASIC27.66■■■□□ 2.02
BRD9Q9H8M2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.66■■■□□ 2.02
BRD9Q9H8M2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
BRD9Q9H8M2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
BRD9Q9H8M2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
BRD9Q9H8M2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.64■■■□□ 2.02
BRD9Q9H8M2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.64■■■□□ 2.02
BRD9Q9H8M2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
BRD9Q9H8M2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
BRD9Q9H8M2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
BRD9Q9H8M2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.62■■■□□ 2.01
BRD9Q9H8M2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.62■■■□□ 2.01
BRD9Q9H8M2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.61■■■□□ 2.01
BRD9Q9H8M2 DUX4L11-201ENST00000611504 1267 ntBASIC27.61■■■□□ 2.01
BRD9Q9H8M2 DUX4L12-201ENST00000614593 1267 ntBASIC27.61■■■□□ 2.01
BRD9Q9H8M2 LINC01971-201ENST00000617888 1048 ntBASIC27.61■■■□□ 2.01
BRD9Q9H8M2 DUX4L14-201ENST00000621227 1267 ntBASIC27.61■■■□□ 2.01
BRD9Q9H8M2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.61■■■□□ 2.01
BRD9Q9H8M2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
BRD9Q9H8M2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
BRD9Q9H8M2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.59■■■□□ 2.01
BRD9Q9H8M2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
BRD9Q9H8M2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.58■■■□□ 2.01
BRD9Q9H8M2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
BRD9Q9H8M2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
BRD9Q9H8M2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
BRD9Q9H8M2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
BRD9Q9H8M2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.57■■■□□ 2
BRD9Q9H8M2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
BRD9Q9H8M2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.56■■■□□ 2
BRD9Q9H8M2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
BRD9Q9H8M2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.55■■■□□ 2
BRD9Q9H8M2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
BRD9Q9H8M2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.54■■■□□ 2
BRD9Q9H8M2 CR559946.2-201ENST00000623684 991 ntBASIC27.54■■■□□ 2
BRD9Q9H8M2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
BRD9Q9H8M2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
BRD9Q9H8M2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
BRD9Q9H8M2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.5■■□□□ 1.99
BRD9Q9H8M2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
BRD9Q9H8M2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.49■■□□□ 1.99
BRD9Q9H8M2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.49■■□□□ 1.99
BRD9Q9H8M2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
BRD9Q9H8M2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
BRD9Q9H8M2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
BRD9Q9H8M2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
BRD9Q9H8M2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.47■■□□□ 1.99
BRD9Q9H8M2 HSD17B1P1-201ENST00000590052 955 ntBASIC27.45■■□□□ 1.98
BRD9Q9H8M2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
BRD9Q9H8M2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
BRD9Q9H8M2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
BRD9Q9H8M2 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
BRD9Q9H8M2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
BRD9Q9H8M2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
BRD9Q9H8M2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms