Protein–RNA interactions for Protein: Q99542

MMP19, Matrix metalloproteinase-19, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19Q99542 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
MMP19Q99542 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.81■■■□□ 2.52
MMP19Q99542 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
MMP19Q99542 AC108673.1-201ENST00000510422 1159 ntBASIC30.8■■■□□ 2.52
MMP19Q99542 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
MMP19Q99542 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.79■■■□□ 2.52
MMP19Q99542 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
MMP19Q99542 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
MMP19Q99542 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.79■■■□□ 2.52
MMP19Q99542 MIR6090-201ENST00000622481 60 ntBASIC30.78■■■□□ 2.52
MMP19Q99542 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
MMP19Q99542 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
MMP19Q99542 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
MMP19Q99542 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
MMP19Q99542 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
MMP19Q99542 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
MMP19Q99542 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
MMP19Q99542 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
MMP19Q99542 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
MMP19Q99542 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
MMP19Q99542 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
MMP19Q99542 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
MMP19Q99542 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
MMP19Q99542 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.72■■■□□ 2.51
MMP19Q99542 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.71■■■□□ 2.51
MMP19Q99542 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.71■■■□□ 2.51
MMP19Q99542 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
MMP19Q99542 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
MMP19Q99542 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
MMP19Q99542 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
MMP19Q99542 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
MMP19Q99542 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
MMP19Q99542 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.68■■■□□ 2.5
MMP19Q99542 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.68■■■□□ 2.5
MMP19Q99542 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
MMP19Q99542 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
MMP19Q99542 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
MMP19Q99542 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.65■■■□□ 2.5
MMP19Q99542 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
MMP19Q99542 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.62■■■□□ 2.49
MMP19Q99542 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
MMP19Q99542 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
MMP19Q99542 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.59■■■□□ 2.49
MMP19Q99542 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.59■■■□□ 2.49
MMP19Q99542 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
MMP19Q99542 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.58■■■□□ 2.49
MMP19Q99542 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.58■■■□□ 2.49
MMP19Q99542 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
MMP19Q99542 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
MMP19Q99542 MIR639-201ENST00000384974 98 ntBASIC30.56■■■□□ 2.48
MMP19Q99542 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
MMP19Q99542 AC120057.4-201ENST00000624722 1615 ntBASIC30.55■■■□□ 2.48
MMP19Q99542 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.54■■■□□ 2.48
MMP19Q99542 MIR4449-201ENST00000578365 66 ntBASIC30.54■■■□□ 2.48
MMP19Q99542 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
MMP19Q99542 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.52■■■□□ 2.48
MMP19Q99542 MIR3648-2-201ENST00000581792 180 ntBASIC30.52■■■□□ 2.48
MMP19Q99542 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
MMP19Q99542 MIR3648-1-201ENST00000615959 180 ntBASIC30.52■■■□□ 2.48
MMP19Q99542 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.52■■■□□ 2.48
MMP19Q99542 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
MMP19Q99542 LINC01971-201ENST00000617888 1048 ntBASIC30.51■■■□□ 2.47
MMP19Q99542 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.51■■■□□ 2.47
MMP19Q99542 AC016575.1-201ENST00000607026 382 ntBASIC30.5■■■□□ 2.47
MMP19Q99542 DUX4L11-201ENST00000611504 1267 ntBASIC30.49■■■□□ 2.47
MMP19Q99542 DUX4L12-201ENST00000614593 1267 ntBASIC30.49■■■□□ 2.47
MMP19Q99542 DUX4L14-201ENST00000621227 1267 ntBASIC30.49■■■□□ 2.47
MMP19Q99542 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.48■■■□□ 2.47
MMP19Q99542 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.48■■■□□ 2.47
MMP19Q99542 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.48■■■□□ 2.47
MMP19Q99542 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
MMP19Q99542 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
MMP19Q99542 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.47■■■□□ 2.47
MMP19Q99542 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
MMP19Q99542 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
MMP19Q99542 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
MMP19Q99542 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
MMP19Q99542 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.44■■■□□ 2.46
MMP19Q99542 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
MMP19Q99542 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.43■■■□□ 2.46
MMP19Q99542 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
MMP19Q99542 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.42■■■□□ 2.46
MMP19Q99542 CR559946.2-201ENST00000623684 991 ntBASIC30.42■■■□□ 2.46
MMP19Q99542 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.42■■■□□ 2.46
MMP19Q99542 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
MMP19Q99542 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.4■■■□□ 2.46
MMP19Q99542 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.4■■■□□ 2.46
MMP19Q99542 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
MMP19Q99542 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
MMP19Q99542 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
MMP19Q99542 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.38■■■□□ 2.45
MMP19Q99542 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
MMP19Q99542 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
MMP19Q99542 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MMP19Q99542 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MMP19Q99542 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.36■■■□□ 2.45
MMP19Q99542 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
MMP19Q99542 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
MMP19Q99542 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.33■■■□□ 2.45
MMP19Q99542 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms