Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC40.85■■■■■ 4.13
ABCA6Q8N139 DUX4L11-201ENST00000611504 1267 ntBASIC40.84■■■■■ 4.13
ABCA6Q8N139 DUX4L12-201ENST00000614593 1267 ntBASIC40.84■■■■■ 4.13
ABCA6Q8N139 DUX4L14-201ENST00000621227 1267 ntBASIC40.84■■■■■ 4.13
ABCA6Q8N139 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC40.83■■■■■ 4.13
ABCA6Q8N139 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC40.83■■■■■ 4.13
ABCA6Q8N139 LINC01971-201ENST00000617888 1048 ntBASIC40.82■■■■■ 4.13
ABCA6Q8N139 AC108673.1-201ENST00000510422 1159 ntBASIC40.81■■■■■ 4.12
ABCA6Q8N139 AGPS-202ENST00000409888 815 ntTSL 4 BASIC40.79■■■■■ 4.12
ABCA6Q8N139 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC40.78■■■■■ 4.12
ABCA6Q8N139 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
ABCA6Q8N139 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
ABCA6Q8N139 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC40.72■■■■■ 4.11
ABCA6Q8N139 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC40.71■■■■■ 4.11
ABCA6Q8N139 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
ABCA6Q8N139 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC40.7■■■■■ 4.11
ABCA6Q8N139 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
ABCA6Q8N139 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
ABCA6Q8N139 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
ABCA6Q8N139 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC40.68■■■■■ 4.1
ABCA6Q8N139 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC40.68■■■■■ 4.1
ABCA6Q8N139 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC40.67■■■■■ 4.1
ABCA6Q8N139 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC40.67■■■■■ 4.1
ABCA6Q8N139 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC40.66■■■■■ 4.1
ABCA6Q8N139 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC40.65■■■■■ 4.1
ABCA6Q8N139 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC40.65■■■■■ 4.1
ABCA6Q8N139 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
ABCA6Q8N139 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC40.64■■■■■ 4.1
ABCA6Q8N139 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC40.64■■■■■ 4.1
ABCA6Q8N139 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC40.64■■■■■ 4.1
ABCA6Q8N139 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
ABCA6Q8N139 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC40.64■■■■■ 4.1
ABCA6Q8N139 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
ABCA6Q8N139 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC40.63■■■■■ 4.09
ABCA6Q8N139 ABHD17AP3-201ENST00000503096 1137 ntBASIC40.62■■■■■ 4.09
ABCA6Q8N139 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC40.62■■■■■ 4.09
ABCA6Q8N139 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC40.62■■■■■ 4.09
ABCA6Q8N139 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC40.61■■■■■ 4.09
ABCA6Q8N139 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC40.59■■■■■ 4.09
ABCA6Q8N139 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC40.58■■■■■ 4.09
ABCA6Q8N139 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC40.58■■■■■ 4.09
ABCA6Q8N139 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
ABCA6Q8N139 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
ABCA6Q8N139 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC40.55■■■■■ 4.08
ABCA6Q8N139 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC40.54■■■■■ 4.08
ABCA6Q8N139 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC40.53■■■■■ 4.08
ABCA6Q8N139 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
ABCA6Q8N139 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC40.52■■■■■ 4.08
ABCA6Q8N139 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
ABCA6Q8N139 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
ABCA6Q8N139 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC40.52■■■■■ 4.08
ABCA6Q8N139 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC40.51■■■■■ 4.08
ABCA6Q8N139 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC40.49■■■■■ 4.07
ABCA6Q8N139 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC40.49■■■■■ 4.07
ABCA6Q8N139 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC40.48■■■■■ 4.07
ABCA6Q8N139 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC40.47■■■■■ 4.07
ABCA6Q8N139 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
ABCA6Q8N139 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC40.46■■■■■ 4.07
ABCA6Q8N139 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC40.46■■■■■ 4.07
ABCA6Q8N139 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC40.45■■■■■ 4.07
ABCA6Q8N139 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
ABCA6Q8N139 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC40.42■■■■■ 4.06
ABCA6Q8N139 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC40.42■■■■■ 4.06
ABCA6Q8N139 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC40.42■■■■■ 4.06
ABCA6Q8N139 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC40.42■■■■■ 4.06
ABCA6Q8N139 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC40.41■■■■■ 4.06
ABCA6Q8N139 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
ABCA6Q8N139 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC40.4■■■■■ 4.06
ABCA6Q8N139 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC40.4■■■■■ 4.06
ABCA6Q8N139 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC40.4■■■■■ 4.06
ABCA6Q8N139 METRNL-202ENST00000570778 967 ntTSL 5 BASIC40.4■■■■■ 4.06
ABCA6Q8N139 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC40.39■■■■■ 4.06
ABCA6Q8N139 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC40.38■■■■■ 4.06
ABCA6Q8N139 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC40.38■■■■■ 4.06
ABCA6Q8N139 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC40.38■■■■■ 4.06
ABCA6Q8N139 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC40.38■■■■■ 4.06
ABCA6Q8N139 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC40.38■■■■■ 4.06
ABCA6Q8N139 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC40.37■■■■■ 4.05
ABCA6Q8N139 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC40.36■■■■■ 4.05
ABCA6Q8N139 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC40.35■■■■■ 4.05
ABCA6Q8N139 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC40.34■■■■■ 4.05
ABCA6Q8N139 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC40.34■■■■■ 4.05
ABCA6Q8N139 DUX4L13-201ENST00000554103 1267 ntBASIC40.34■■■■■ 4.05
ABCA6Q8N139 DUX4L15-201ENST00000611059 1267 ntBASIC40.34■■■■■ 4.05
ABCA6Q8N139 DUX4L23-201ENST00000615195 1269 ntBASIC40.34■■■■■ 4.05
ABCA6Q8N139 DUX4L24-201ENST00000617576 1269 ntBASIC40.34■■■■■ 4.05
ABCA6Q8N139 DUX4L22-201ENST00000618238 1269 ntBASIC40.34■■■■■ 4.05
ABCA6Q8N139 DUX4L20-201ENST00000619712 1269 ntBASIC40.34■■■■■ 4.05
ABCA6Q8N139 DUX4L21-201ENST00000622058 1269 ntBASIC40.34■■■■■ 4.05
ABCA6Q8N139 DUX4L10-201ENST00000622460 1267 ntBASIC40.34■■■■■ 4.05
ABCA6Q8N139 DUX4L25-201ENST00000624915 1269 ntBASIC40.34■■■■■ 4.05
ABCA6Q8N139 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC40.31■■■■■ 4.04
ABCA6Q8N139 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC40.3■■■■■ 4.04
ABCA6Q8N139 SRP68-213ENST00000629930 165 ntTSL 5 BASIC40.3■■■■■ 4.04
ABCA6Q8N139 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
ABCA6Q8N139 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC40.29■■■■■ 4.04
ABCA6Q8N139 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC40.28■■■■■ 4.04
ABCA6Q8N139 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
ABCA6Q8N139 RARRES2P2-201ENST00000394842 485 ntBASIC40.25■■■■■ 4.03
ABCA6Q8N139 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC40.25■■■■■ 4.03
Retrieved 100 of 98,524 protein–RNA pairs in 7.5 ms