Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.84■□□□□ 0.61
NFE4Q86UQ8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.84■□□□□ 0.61
NFE4Q86UQ8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
NFE4Q86UQ8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
NFE4Q86UQ8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NFE4Q86UQ8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NFE4Q86UQ8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NFE4Q86UQ8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFE4Q86UQ8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
NFE4Q86UQ8 SETD8P1-201ENST00000623146 1180 ntBASIC18.82■□□□□ 0.6
NFE4Q86UQ8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFE4Q86UQ8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NFE4Q86UQ8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NFE4Q86UQ8 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NFE4Q86UQ8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFE4Q86UQ8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFE4Q86UQ8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NFE4Q86UQ8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.79■□□□□ 0.6
NFE4Q86UQ8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFE4Q86UQ8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFE4Q86UQ8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFE4Q86UQ8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NFE4Q86UQ8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NFE4Q86UQ8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NFE4Q86UQ8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.77■□□□□ 0.6
NFE4Q86UQ8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFE4Q86UQ8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.77■□□□□ 0.6
NFE4Q86UQ8 AC097358.2-201ENST00000607541 1159 ntBASIC18.77■□□□□ 0.6
NFE4Q86UQ8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NFE4Q86UQ8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NFE4Q86UQ8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.76■□□□□ 0.59
NFE4Q86UQ8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NFE4Q86UQ8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.76■□□□□ 0.59
NFE4Q86UQ8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFE4Q86UQ8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.75■□□□□ 0.59
NFE4Q86UQ8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFE4Q86UQ8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.74■□□□□ 0.59
NFE4Q86UQ8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NFE4Q86UQ8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFE4Q86UQ8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFE4Q86UQ8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NFE4Q86UQ8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NFE4Q86UQ8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NFE4Q86UQ8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NFE4Q86UQ8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NFE4Q86UQ8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NFE4Q86UQ8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.71■□□□□ 0.59
NFE4Q86UQ8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NFE4Q86UQ8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.71■□□□□ 0.59
NFE4Q86UQ8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NFE4Q86UQ8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFE4Q86UQ8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NFE4Q86UQ8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.7■□□□□ 0.58
NFE4Q86UQ8 ST7-AS1-201ENST00000456775 1889 ntBASIC18.7■□□□□ 0.58
NFE4Q86UQ8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.7■□□□□ 0.58
NFE4Q86UQ8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NFE4Q86UQ8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.7■□□□□ 0.58
NFE4Q86UQ8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC18.69■□□□□ 0.58
NFE4Q86UQ8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFE4Q86UQ8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFE4Q86UQ8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
NFE4Q86UQ8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.68■□□□□ 0.58
NFE4Q86UQ8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.68■□□□□ 0.58
NFE4Q86UQ8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.68■□□□□ 0.58
NFE4Q86UQ8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NFE4Q86UQ8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NFE4Q86UQ8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NFE4Q86UQ8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.67■□□□□ 0.58
NFE4Q86UQ8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
NFE4Q86UQ8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.67■□□□□ 0.58
NFE4Q86UQ8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFE4Q86UQ8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NFE4Q86UQ8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFE4Q86UQ8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NFE4Q86UQ8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFE4Q86UQ8 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFE4Q86UQ8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NFE4Q86UQ8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.65■□□□□ 0.58
NFE4Q86UQ8 AC142086.6-201ENST00000621154 1765 ntBASIC18.64■□□□□ 0.57
NFE4Q86UQ8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NFE4Q86UQ8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
NFE4Q86UQ8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NFE4Q86UQ8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.63■□□□□ 0.57
NFE4Q86UQ8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.63■□□□□ 0.57
NFE4Q86UQ8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFE4Q86UQ8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NFE4Q86UQ8 AC136428.2-201ENST00000563187 214 ntBASIC18.63■□□□□ 0.57
NFE4Q86UQ8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NFE4Q86UQ8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NFE4Q86UQ8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NFE4Q86UQ8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
NFE4Q86UQ8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.61■□□□□ 0.57
NFE4Q86UQ8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.6■□□□□ 0.57
NFE4Q86UQ8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
NFE4Q86UQ8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFE4Q86UQ8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
NFE4Q86UQ8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFE4Q86UQ8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
NFE4Q86UQ8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NFE4Q86UQ8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms