Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RTL6Q6ICC9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.04■■□□□ 1.44
RTL6Q6ICC9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.04■■□□□ 1.44
RTL6Q6ICC9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.04■■□□□ 1.44
RTL6Q6ICC9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RTL6Q6ICC9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.04■■□□□ 1.44
RTL6Q6ICC9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.03■■□□□ 1.44
RTL6Q6ICC9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RTL6Q6ICC9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTL6Q6ICC9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.03■■□□□ 1.44
RTL6Q6ICC9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.03■■□□□ 1.44
RTL6Q6ICC9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.03■■□□□ 1.44
RTL6Q6ICC9 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
RTL6Q6ICC9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTL6Q6ICC9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RTL6Q6ICC9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.01■■□□□ 1.43
RTL6Q6ICC9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTL6Q6ICC9 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTL6Q6ICC9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTL6Q6ICC9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTL6Q6ICC9 ZNRF2P2-203ENST00000454624 420 ntBASIC24■■□□□ 1.43
RTL6Q6ICC9 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24■■□□□ 1.43
RTL6Q6ICC9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTL6Q6ICC9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RTL6Q6ICC9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RTL6Q6ICC9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTL6Q6ICC9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RTL6Q6ICC9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.98■■□□□ 1.43
RTL6Q6ICC9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.98■■□□□ 1.43
RTL6Q6ICC9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RTL6Q6ICC9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RTL6Q6ICC9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTL6Q6ICC9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RTL6Q6ICC9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.95■■□□□ 1.42
RTL6Q6ICC9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.95■■□□□ 1.42
RTL6Q6ICC9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.95■■□□□ 1.42
RTL6Q6ICC9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RTL6Q6ICC9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.92■■□□□ 1.42
RTL6Q6ICC9 AC120057.4-201ENST00000624722 1615 ntBASIC23.92■■□□□ 1.42
RTL6Q6ICC9 DUX4L29-201ENST00000425409 679 ntBASIC23.91■■□□□ 1.42
RTL6Q6ICC9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RTL6Q6ICC9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RTL6Q6ICC9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTL6Q6ICC9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.9■■□□□ 1.42
RTL6Q6ICC9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RTL6Q6ICC9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.88■■□□□ 1.41
RTL6Q6ICC9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL6Q6ICC9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RTL6Q6ICC9 MIR6090-201ENST00000622481 60 ntBASIC23.88■■□□□ 1.41
RTL6Q6ICC9 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RTL6Q6ICC9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RTL6Q6ICC9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTL6Q6ICC9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RTL6Q6ICC9 AC021231.2-201ENST00000594613 730 ntBASIC23.87■■□□□ 1.41
RTL6Q6ICC9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTL6Q6ICC9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTL6Q6ICC9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.86■■□□□ 1.41
RTL6Q6ICC9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTL6Q6ICC9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RTL6Q6ICC9 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTL6Q6ICC9 AC108673.1-201ENST00000510422 1159 ntBASIC23.85■■□□□ 1.41
RTL6Q6ICC9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.85■■□□□ 1.41
RTL6Q6ICC9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTL6Q6ICC9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.84■■□□□ 1.41
RTL6Q6ICC9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTL6Q6ICC9 HLA-V-202ENST00000446817 847 ntBASIC23.84■■□□□ 1.41
RTL6Q6ICC9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.84■■□□□ 1.41
RTL6Q6ICC9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTL6Q6ICC9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RTL6Q6ICC9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RTL6Q6ICC9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RTL6Q6ICC9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.82■■□□□ 1.4
RTL6Q6ICC9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTL6Q6ICC9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTL6Q6ICC9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.81■■□□□ 1.4
RTL6Q6ICC9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL6Q6ICC9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL6Q6ICC9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.81■■□□□ 1.4
RTL6Q6ICC9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.81■■□□□ 1.4
RTL6Q6ICC9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RTL6Q6ICC9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RTL6Q6ICC9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC23.78■■□□□ 1.4
RTL6Q6ICC9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTL6Q6ICC9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL6Q6ICC9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.78■■□□□ 1.4
RTL6Q6ICC9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.78■■□□□ 1.4
RTL6Q6ICC9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL6Q6ICC9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RTL6Q6ICC9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTL6Q6ICC9 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTL6Q6ICC9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.77■■□□□ 1.4
RTL6Q6ICC9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RTL6Q6ICC9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RTL6Q6ICC9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL6Q6ICC9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL6Q6ICC9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RTL6Q6ICC9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.76■■□□□ 1.39
RTL6Q6ICC9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTL6Q6ICC9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTL6Q6ICC9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms