Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.64■■□□□ 1.86
RSPO4Q2I0M5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
RSPO4Q2I0M5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RSPO4Q2I0M5 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.63■■□□□ 1.85
RSPO4Q2I0M5 AC108673.1-201ENST00000510422 1159 ntBASIC26.63■■□□□ 1.85
RSPO4Q2I0M5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.63■■□□□ 1.85
RSPO4Q2I0M5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RSPO4Q2I0M5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RSPO4Q2I0M5 MIR6090-201ENST00000622481 60 ntBASIC26.62■■□□□ 1.85
RSPO4Q2I0M5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RSPO4Q2I0M5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RSPO4Q2I0M5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RSPO4Q2I0M5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RSPO4Q2I0M5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.58■■□□□ 1.85
RSPO4Q2I0M5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RSPO4Q2I0M5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RSPO4Q2I0M5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RSPO4Q2I0M5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.57■■□□□ 1.84
RSPO4Q2I0M5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RSPO4Q2I0M5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.54■■□□□ 1.84
RSPO4Q2I0M5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RSPO4Q2I0M5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RSPO4Q2I0M5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RSPO4Q2I0M5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.53■■□□□ 1.84
RSPO4Q2I0M5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RSPO4Q2I0M5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RSPO4Q2I0M5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RSPO4Q2I0M5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.51■■□□□ 1.83
RSPO4Q2I0M5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RSPO4Q2I0M5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.5■■□□□ 1.83
RSPO4Q2I0M5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RSPO4Q2I0M5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.48■■□□□ 1.83
RSPO4Q2I0M5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RSPO4Q2I0M5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RSPO4Q2I0M5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.47■■□□□ 1.83
RSPO4Q2I0M5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.46■■□□□ 1.83
RSPO4Q2I0M5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.45■■□□□ 1.82
RSPO4Q2I0M5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.45■■□□□ 1.82
RSPO4Q2I0M5 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RSPO4Q2I0M5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.44■■□□□ 1.82
RSPO4Q2I0M5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 GPX1-201ENST00000419349 1106 ntBASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 AC012354.3-201ENST00000623734 483 ntBASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RSPO4Q2I0M5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RSPO4Q2I0M5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 DUX4L13-201ENST00000554103 1267 ntBASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 DUX4L15-201ENST00000611059 1267 ntBASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 DUX4L23-201ENST00000615195 1269 ntBASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 DUX4L24-201ENST00000617576 1269 ntBASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 DUX4L22-201ENST00000618238 1269 ntBASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 DUX4L20-201ENST00000619712 1269 ntBASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 DUX4L21-201ENST00000622058 1269 ntBASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 DUX4L10-201ENST00000622460 1267 ntBASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 DUX4L25-201ENST00000624915 1269 ntBASIC26.41■■□□□ 1.82
RSPO4Q2I0M5 RNF126P1-201ENST00000567452 1320 ntBASIC26.4■■□□□ 1.82
RSPO4Q2I0M5 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.4■■□□□ 1.82
RSPO4Q2I0M5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.4■■□□□ 1.82
RSPO4Q2I0M5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RSPO4Q2I0M5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RSPO4Q2I0M5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
RSPO4Q2I0M5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RSPO4Q2I0M5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RSPO4Q2I0M5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.36■■□□□ 1.81
RSPO4Q2I0M5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RSPO4Q2I0M5 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.36■■□□□ 1.81
RSPO4Q2I0M5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RSPO4Q2I0M5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
RSPO4Q2I0M5 NTF6A-201ENST00000591175 560 ntBASIC26.35■■□□□ 1.81
RSPO4Q2I0M5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RSPO4Q2I0M5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RSPO4Q2I0M5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RSPO4Q2I0M5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RSPO4Q2I0M5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RSPO4Q2I0M5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RSPO4Q2I0M5 AC018358.1-201ENST00000631079 1402 ntBASIC26.3■■□□□ 1.8
RSPO4Q2I0M5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RSPO4Q2I0M5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.28■■□□□ 1.8
RSPO4Q2I0M5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RSPO4Q2I0M5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RSPO4Q2I0M5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
RSPO4Q2I0M5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
RSPO4Q2I0M5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RSPO4Q2I0M5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RSPO4Q2I0M5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RSPO4Q2I0M5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RSPO4Q2I0M5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RSPO4Q2I0M5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RSPO4Q2I0M5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RSPO4Q2I0M5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms