Protein–RNA interactions for Protein: Q03776

PRP42, U1 small nuclear ribonucleoprotein component PRP42, yeastyeast

Known RBP Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP42Q03776 TIM44YIL022W 1296 nt10.87□□□□□ -0.67
PRP42Q03776 SLG1YOR008C 1137 nt10.87□□□□□ -0.67
PRP42Q03776 MEP3YPR138C 1470 nt10.87□□□□□ -0.67
PRP42Q03776 LSB5YCL034W 1065 nt10.86□□□□□ -0.67
PRP42Q03776 YMR103CYMR103C 363 nt10.85□□□□□ -0.67
PRP42Q03776 BRR1YPR057W 1026 nt10.84□□□□□ -0.67
PRP42Q03776 DBP1YPL119C 1854 nt10.84□□□□□ -0.67
PRP42Q03776 YJL118WYJL118W 660 nt10.83□□□□□ -0.68
PRP42Q03776 GAL3YDR009W 1563 nt10.82□□□□□ -0.68
PRP42Q03776 LEU9YOR108W 1815 nt10.81□□□□□ -0.68
PRP42Q03776 YBL086CYBL086C 1401 nt10.81□□□□□ -0.68
PRP42Q03776 YJR114WYJR114W 393 nt10.8□□□□□ -0.68
PRP42Q03776 TOA2YKL058W 369 nt10.8□□□□□ -0.68
PRP42Q03776 HXT1YHR094C 1713 nt10.8□□□□□ -0.68
PRP42Q03776 YMR262WYMR262W 942 nt10.79□□□□□ -0.68
PRP42Q03776 RPT5YOR117W 1305 nt10.79□□□□□ -0.68
PRP42Q03776 RIB7YBR153W 735 nt10.78□□□□□ -0.68
PRP42Q03776 SSN3YPL042C 1668 nt10.77□□□□□ -0.69
PRP42Q03776 NUC1YJL208C 990 nt10.77□□□□□ -0.69
PRP42Q03776 TIP1YBR067C 633 nt10.76□□□□□ -0.69
PRP42Q03776 PAR32YDL173W 888 nt10.74□□□□□ -0.69
PRP42Q03776 SNZ1YMR096W 894 nt10.74□□□□□ -0.69
PRP42Q03776 SAM3YPL274W 1764 nt10.74□□□□□ -0.69
PRP42Q03776 BNI5YNL166C 1347 nt10.73□□□□□ -0.69
PRP42Q03776 RIB1YBL033C 1038 nt10.72□□□□□ -0.69
PRP42Q03776 GND2YGR256W 1479 nt10.72□□□□□ -0.69
PRP42Q03776 PHO23YNL097C 993 nt10.71□□□□□ -0.69
PRP42Q03776 PBP1YGR178C 2169 nt10.7□□□□□ -0.7
PRP42Q03776 POT1YIL160C 1254 nt10.7□□□□□ -0.7
PRP42Q03776 HIF1YLL022C 1158 nt10.7□□□□□ -0.7
PRP42Q03776 MHF1YOL086W-A 273 nt10.7□□□□□ -0.7
PRP42Q03776 TUB4YLR212C 1422 nt10.69□□□□□ -0.7
PRP42Q03776 TRT2tT(CGU)K 72 nt10.69□□□□□ -0.7
PRP42Q03776 GSF2YML048W 1212 nt10.69□□□□□ -0.7
PRP42Q03776 MSC1YML128C 1542 nt10.68□□□□□ -0.7
PRP42Q03776 ERG6YML008C 1152 nt10.67□□□□□ -0.7
PRP42Q03776 YPR126CYPR126C 309 nt10.65□□□□□ -0.7
PRP42Q03776 CTI6YPL181W 1521 nt10.64□□□□□ -0.71
PRP42Q03776 NAR1YNL240C 1476 nt10.64□□□□□ -0.71
PRP42Q03776 TPS1YBR126C 1488 nt10.64□□□□□ -0.71
PRP42Q03776 SOD2YHR008C 702 nt10.64□□□□□ -0.71
PRP42Q03776 YIA6YIL006W 1122 nt10.64□□□□□ -0.71
PRP42Q03776 UME6YDR207C 2511 nt10.64□□□□□ -0.71
PRP42Q03776 MCH5YOR306C 1566 nt10.64□□□□□ -0.71
PRP42Q03776 SEC61YLR378C 1443 nt10.62□□□□□ -0.71
PRP42Q03776 SAM2YDR502C 1155 nt10.62□□□□□ -0.71
PRP42Q03776 SHY1YGR112W 1170 nt10.62□□□□□ -0.71
PRP42Q03776 APS2YJR058C 444 nt10.62□□□□□ -0.71
PRP42Q03776 UFO1YML088W 2007 nt10.62□□□□□ -0.71
PRP42Q03776 RAS2YNL098C 969 nt10.61□□□□□ -0.71
PRP42Q03776 OYE2YHR179W 1203 nt10.6□□□□□ -0.71
PRP42Q03776 IML3YBR107C 738 nt10.6□□□□□ -0.71
PRP42Q03776 DAK2YFL053W 1776 nt10.6□□□□□ -0.71
PRP42Q03776 OXA1YER154W 1209 nt10.58□□□□□ -0.72
PRP42Q03776 CYT2YKL087C 675 nt10.58□□□□□ -0.72
PRP42Q03776 NIF3YGL221C 867 nt10.56□□□□□ -0.72
PRP42Q03776 FUB1YCR076C 753 nt10.55□□□□□ -0.72
PRP42Q03776 YNL024CYNL024C 741 nt10.55□□□□□ -0.72
PRP42Q03776 OYE3YPL171C 1203 nt10.55□□□□□ -0.72
PRP42Q03776 YER188WYER188W 720 nt10.54□□□□□ -0.72
PRP42Q03776 EAF3YPR023C 1206 nt10.54□□□□□ -0.72
PRP42Q03776 URA6YKL024C 615 nt10.53□□□□□ -0.72
PRP42Q03776 YCP4YCR004C 744 nt10.51□□□□□ -0.73
PRP42Q03776 IGD1YFR017C 588 nt10.5□□□□□ -0.73
PRP42Q03776 PET8YNL003C 855 nt10.49□□□□□ -0.73
PRP42Q03776 YAT1YAR035W 2064 nt10.47□□□□□ -0.73
PRP42Q03776 TMA23YMR269W 636 nt10.47□□□□□ -0.73
PRP42Q03776 SAM50YNL026W 1455 nt10.47□□□□□ -0.73
PRP42Q03776 DLD2YDL178W 1593 nt10.45□□□□□ -0.74
PRP42Q03776 POP2YNR052C 1302 nt10.44□□□□□ -0.74
PRP42Q03776 DDI1YER143W 1287 nt10.43□□□□□ -0.74
PRP42Q03776 FLR1YBR008C 1647 nt10.43□□□□□ -0.74
PRP42Q03776 YER152W-AYER152W-A 567 nt10.42□□□□□ -0.74
PRP42Q03776 OSH7YHR001W 1314 nt10.41□□□□□ -0.74
PRP42Q03776 YCR025CYCR025C 411 nt10.41□□□□□ -0.74
PRP42Q03776 LSM5YER146W 282 nt10.41□□□□□ -0.74
PRP42Q03776 FRE6YLL051C 2139 nt10.41□□□□□ -0.74
PRP42Q03776 IPL1YPL209C 1104 nt10.41□□□□□ -0.74
PRP42Q03776 ZRT3YKL175W 1512 nt10.41□□□□□ -0.74
PRP42Q03776 QDR2YIL121W 1629 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)DtA(AGC)D 73 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)FtA(AGC)F 73 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)GtA(AGC)G 73 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)HtA(AGC)H 73 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)JtA(AGC)J 73 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)K1tA(AGC)K1 73 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)K2tA(AGC)K2 73 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)LtA(AGC)L 73 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)M1tA(AGC)M1 73 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)M2tA(AGC)M2 73 nt10.4□□□□□ -0.74
PRP42Q03776 tA(AGC)PtA(AGC)P 73 nt10.4□□□□□ -0.74
PRP42Q03776 IMO32YGR031W 1029 nt10.4□□□□□ -0.74
PRP42Q03776 SPS100YHR139C 981 nt10.39□□□□□ -0.75
PRP42Q03776 KRE1YNL322C 942 nt10.39□□□□□ -0.75
PRP42Q03776 SOL2YCR073W-A 948 nt10.37□□□□□ -0.75
PRP42Q03776 ACO2YJL200C 2370 nt10.37□□□□□ -0.75
PRP42Q03776 YJL067WYJL067W 351 nt10.36□□□□□ -0.75
PRP42Q03776 RSC8YFR037C 1674 nt10.34□□□□□ -0.75
PRP42Q03776 YPS3YLR121C 1527 nt10.34□□□□□ -0.75
PRP42Q03776 YFR036W-AYFR036W-A 651 nt10.34□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms