Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 YJL067WYJL067W 351 nt10.58□□□□□ -0.72
HDA1P53973 CYT2YKL087C 675 nt10.58□□□□□ -0.72
HDA1P53973 OYE3YPL171C 1203 nt10.58□□□□□ -0.72
HDA1P53973 ZRT3YKL175W 1512 nt10.58□□□□□ -0.72
HDA1P53973 ADH7YCR105W 1086 nt10.57□□□□□ -0.72
HDA1P53973 RDN25-1RDN25-1 3396 nt10.56□□□□□ -0.72
HDA1P53973 RDN25-2RDN25-2 3396 nt10.56□□□□□ -0.72
HDA1P53973 FLR1YBR008C 1647 nt10.56□□□□□ -0.72
HDA1P53973 PAU15YIR041W 375 nt10.56□□□□□ -0.72
HDA1P53973 GAL3YDR009W 1563 nt10.56□□□□□ -0.72
HDA1P53973 YAT1YAR035W 2064 nt10.55□□□□□ -0.72
HDA1P53973 YJL118WYJL118W 660 nt10.55□□□□□ -0.72
HDA1P53973 PHO23YNL097C 993 nt10.55□□□□□ -0.72
HDA1P53973 MSC1YML128C 1542 nt10.54□□□□□ -0.72
HDA1P53973 MCH5YOR306C 1566 nt10.52□□□□□ -0.72
HDA1P53973 FUB1YCR076C 753 nt10.51□□□□□ -0.73
HDA1P53973 UME6YDR207C 2511 nt10.5□□□□□ -0.73
HDA1P53973 DLD2YDL178W 1593 nt10.49□□□□□ -0.73
HDA1P53973 CPD1YGR247W 720 nt10.49□□□□□ -0.73
HDA1P53973 LSB5YCL034W 1065 nt10.49□□□□□ -0.73
HDA1P53973 YJL225CYJL225C 5277 nt10.48□□□□□ -0.73
HDA1P53973 SNZ1YMR096W 894 nt10.48□□□□□ -0.73
HDA1P53973 RPT5YOR117W 1305 nt10.48□□□□□ -0.73
HDA1P53973 FMS1YMR020W 1527 nt10.48□□□□□ -0.73
HDA1P53973 SEC61YLR378C 1443 nt10.47□□□□□ -0.73
HDA1P53973 CCT5YJR064W 1689 nt10.47□□□□□ -0.73
HDA1P53973 OXA1YER154W 1209 nt10.46□□□□□ -0.73
HDA1P53973 PET8YNL003C 855 nt10.46□□□□□ -0.73
HDA1P53973 TPS1YBR126C 1488 nt10.46□□□□□ -0.74
HDA1P53973 HEM13YDR044W 987 nt10.45□□□□□ -0.74
HDA1P53973 SAM2YDR502C 1155 nt10.45□□□□□ -0.74
HDA1P53973 YPS3YLR121C 1527 nt10.44□□□□□ -0.74
HDA1P53973 NUC1YJL208C 990 nt10.44□□□□□ -0.74
HDA1P53973 YER188WYER188W 720 nt10.43□□□□□ -0.74
HDA1P53973 RSC8YFR037C 1674 nt10.42□□□□□ -0.74
HDA1P53973 ACH1YBL015W 1581 nt10.42□□□□□ -0.74
HDA1P53973 RAS2YNL098C 969 nt10.41□□□□□ -0.74
HDA1P53973 EAF3YPR023C 1206 nt10.4□□□□□ -0.74
HDA1P53973 TAT2YOL020W 1779 nt10.39□□□□□ -0.75
HDA1P53973 ESS1YJR017C 513 nt10.38□□□□□ -0.75
HDA1P53973 SPP2YOR148C 558 nt10.38□□□□□ -0.75
HDA1P53973 OYE2YHR179W 1203 nt10.37□□□□□ -0.75
HDA1P53973 RPC82YPR190C 1965 nt10.37□□□□□ -0.75
HDA1P53973 YDR455CYDR455C 309 nt10.34□□□□□ -0.75
HDA1P53973 PGC1YPL206C 966 nt10.34□□□□□ -0.75
HDA1P53973 DDI1YER143W 1287 nt10.33□□□□□ -0.76
HDA1P53973 RIB7YBR153W 735 nt10.33□□□□□ -0.76
HDA1P53973 CWC15YDR163W 528 nt10.32□□□□□ -0.76
HDA1P53973 TMA23YMR269W 636 nt10.32□□□□□ -0.76
HDA1P53973 YPR126CYPR126C 309 nt10.32□□□□□ -0.76
HDA1P53973 THI72YOR192C 1800 nt10.32□□□□□ -0.76
HDA1P53973 SOL2YCR073W-A 948 nt10.31□□□□□ -0.76
HDA1P53973 tS(GCU)LtS(GCU)L 80 nt10.31□□□□□ -0.76
HDA1P53973 PAU5YFL020C 369 nt10.3□□□□□ -0.76
HDA1P53973 OSH7YHR001W 1314 nt10.3□□□□□ -0.76
HDA1P53973 DAK2YFL053W 1776 nt10.29□□□□□ -0.76
HDA1P53973 YOR325WYOR325W 474 nt10.27□□□□□ -0.77
HDA1P53973 LSM5YER146W 282 nt10.26□□□□□ -0.77
HDA1P53973 CTI6YPL181W 1521 nt10.26□□□□□ -0.77
HDA1P53973 INA1YLR413W 2028 nt10.24□□□□□ -0.77
HDA1P53973 YFR036W-AYFR036W-A 651 nt10.24□□□□□ -0.77
HDA1P53973 YMR262WYMR262W 942 nt10.24□□□□□ -0.77
HDA1P53973 YBR232CYBR232C 360 nt10.23□□□□□ -0.77
HDA1P53973 RDN37-1RDN37-1 5354 nt10.22□□□□□ -0.77
HDA1P53973 RDN37-2RDN37-2 5354 nt10.22□□□□□ -0.77
HDA1P53973 IMO32YGR031W 1029 nt10.21□□□□□ -0.77
HDA1P53973 APS2YJR058C 444 nt10.2□□□□□ -0.78
HDA1P53973 YIL100C-AYIL100C-A 339 nt10.18□□□□□ -0.78
HDA1P53973 TAF13YML098W 504 nt10.18□□□□□ -0.78
HDA1P53973 MHF1YOL086W-A 273 nt10.18□□□□□ -0.78
HDA1P53973 NIF3YGL221C 867 nt10.17□□□□□ -0.78
HDA1P53973 SEN2YLR105C 1134 nt10.16□□□□□ -0.78
HDA1P53973 STP3YLR375W 1032 nt10.16□□□□□ -0.78
HDA1P53973 ERG13YML126C 1476 nt10.16□□□□□ -0.78
HDA1P53973 VPS62YGR141W 1404 nt10.16□□□□□ -0.78
HDA1P53973 LSB6YJL100W 1824 nt10.14□□□□□ -0.79
HDA1P53973 POT1YIL160C 1254 nt10.14□□□□□ -0.79
HDA1P53973 IML3YBR107C 738 nt10.14□□□□□ -0.79
HDA1P53973 CCT2YIL142W 1584 nt10.14□□□□□ -0.79
HDA1P53973 SPT20YOL148C 1815 nt10.12□□□□□ -0.79
HDA1P53973 ILV3YJR016C 1758 nt10.12□□□□□ -0.79
HDA1P53973 ASP3-1YLR155C 1089 nt10.12□□□□□ -0.79
HDA1P53973 ASP3-2YLR157C 1089 nt10.12□□□□□ -0.79
HDA1P53973 ASP3-3YLR158C 1089 nt10.12□□□□□ -0.79
HDA1P53973 ASP3-4YLR160C 1089 nt10.12□□□□□ -0.79
HDA1P53973 YJL064WYJL064W 396 nt10.11□□□□□ -0.79
HDA1P53973 YNL024CYNL024C 741 nt10.11□□□□□ -0.79
HDA1P53973 PUP1YOR157C 786 nt10.11□□□□□ -0.79
HDA1P53973 SAC7YDR389W 1965 nt10.11□□□□□ -0.79
HDA1P53973 SPS100YHR139C 981 nt10.1□□□□□ -0.79
HDA1P53973 AIM1YAL046C 357 nt10.1□□□□□ -0.79
HDA1P53973 RRT8YOL048C 1029 nt10.1□□□□□ -0.79
HDA1P53973 TUB4YLR212C 1422 nt10.09□□□□□ -0.79
HDA1P53973 YDL086WYDL086W 822 nt10.09□□□□□ -0.79
HDA1P53973 CDD1YLR245C 429 nt10.09□□□□□ -0.79
HDA1P53973 OPI10YOL032W 741 nt10.08□□□□□ -0.8
HDA1P53973 BET2YPR176C 978 nt10.07□□□□□ -0.8
HDA1P53973 ADE8YDR408C 645 nt10.06□□□□□ -0.8
HDA1P53973 NAS2YIL007C 663 nt10.05□□□□□ -0.8
HDA1P53973 OPI3YJR073C 621 nt10.05□□□□□ -0.8
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms