Protein–RNA interactions for Protein: P48566

MSB3, GTPase-activating protein GYP3, yeast

Predicted RBP Predictions only

Length 633 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	P48566	PRM5	YIL117C	957 nt		11.98	□□□□□ -0.49
MSB3	P48566	MEP3	YPR138C	1470 nt		11.96	□□□□□ -0.49
MSB3	P48566	PAR32	YDL173W	888 nt		11.96	□□□□□ -0.49
MSB3	P48566	YIA6	YIL006W	1122 nt		11.96	□□□□□ -0.49
MSB3	P48566	YKR005C	YKR005C	1578 nt		11.96	□□□□□ -0.5
MSB3	P48566	YMR103C	YMR103C	363 nt		11.95	□□□□□ -0.5
MSB3	P48566	ARO7	YPR060C	771 nt		11.95	□□□□□ -0.5
MSB3	P48566	SAM35	YHR083W	990 nt		11.94	□□□□□ -0.5
MSB3	P48566	LSB5	YCL034W	1065 nt		11.94	□□□□□ -0.5
MSB3	P48566	SAM3	YPL274W	1764 nt		11.94	□□□□□ -0.5
MSB3	P48566	TUB4	YLR212C	1422 nt		11.94	□□□□□ -0.5
MSB3	P48566	YBL086C	YBL086C	1401 nt		11.89	□□□□□ -0.51
MSB3	P48566	APS2	YJR058C	444 nt		11.89	□□□□□ -0.51
MSB3	P48566	BRR1	YPR057W	1026 nt		11.89	□□□□□ -0.51
MSB3	P48566	RPT5	YOR117W	1305 nt		11.88	□□□□□ -0.51
MSB3	P48566	DBP1	YPL119C	1854 nt		11.88	□□□□□ -0.51
MSB3	P48566	GSF2	YML048W	1212 nt		11.87	□□□□□ -0.51
MSB3	P48566	SSN3	YPL042C	1668 nt		11.87	□□□□□ -0.51
MSB3	P48566	LEU9	YOR108W	1815 nt		11.86	□□□□□ -0.51
MSB3	P48566	POT1	YIL160C	1254 nt		11.86	□□□□□ -0.51
MSB3	P48566	IRC24	YIR036C	792 nt		11.86	□□□□□ -0.51
MSB3	P48566	PAM17	YKR065C	594 nt		11.86	□□□□□ -0.51
MSB3	P48566	MHF1	YOL086W-A	273 nt		11.86	□□□□□ -0.51
MSB3	P48566	RIB7	YBR153W	735 nt		11.86	□□□□□ -0.51
MSB3	P48566	TOA2	YKL058W	369 nt		11.84	□□□□□ -0.51
MSB3	P48566	NUC1	YJL208C	990 nt		11.83	□□□□□ -0.52
MSB3	P48566	YPR126C	YPR126C	309 nt		11.83	□□□□□ -0.52
MSB3	P48566	BNI5	YNL166C	1347 nt		11.83	□□□□□ -0.52
MSB3	P48566	POP2	YNR052C	1302 nt		11.82	□□□□□ -0.52
MSB3	P48566	CTI6	YPL181W	1521 nt		11.81	□□□□□ -0.52
MSB3	P48566	YER152W-A	YER152W-A	567 nt		11.8	□□□□□ -0.52
MSB3	P48566	HXT1	YHR094C	1713 nt		11.8	□□□□□ -0.52
MSB3	P48566	NIF3	YGL221C	867 nt		11.78	□□□□□ -0.52
MSB3	P48566	PHO23	YNL097C	993 nt		11.78	□□□□□ -0.52
MSB3	P48566	HIF1	YLL022C	1158 nt		11.77	□□□□□ -0.53
MSB3	P48566	QDR2	YIL121W	1629 nt		11.77	□□□□□ -0.53
MSB3	P48566	GND2	YGR256W	1479 nt		11.76	□□□□□ -0.53
MSB3	P48566	YCP4	YCR004C	744 nt		11.76	□□□□□ -0.53
MSB3	P48566	TPS1	YBR126C	1488 nt		11.76	□□□□□ -0.53
MSB3	P48566	SAM50	YNL026W	1455 nt		11.75	□□□□□ -0.53
MSB3	P48566	MSC1	YML128C	1542 nt		11.75	□□□□□ -0.53
MSB3	P48566	DAK2	YFL053W	1776 nt		11.73	□□□□□ -0.53
MSB3	P48566	PRP4	YPR178W	1398 nt		11.72	□□□□□ -0.53
MSB3	P48566	TRT2	tT(CGU)K	72 nt		11.72	□□□□□ -0.53
MSB3	P48566	KRE1	YNL322C	942 nt		11.71	□□□□□ -0.53
MSB3	P48566	IGD1	YFR017C	588 nt		11.7	□□□□□ -0.54
MSB3	P48566	IML3	YBR107C	738 nt		11.69	□□□□□ -0.54
MSB3	P48566	UFO1	YML088W	2007 nt		11.67	□□□□□ -0.54
MSB3	P48566	OYE2	YHR179W	1203 nt		11.67	□□□□□ -0.54
MSB3	P48566	BUD20	YLR074C	501 nt		11.67	□□□□□ -0.54
MSB3	P48566	DPS1	YLL018C	1674 nt		11.66	□□□□□ -0.54
MSB3	P48566	RAS2	YNL098C	969 nt		11.64	□□□□□ -0.55
MSB3	P48566	REG2	YBR050C	1017 nt		11.64	□□□□□ -0.55
MSB3	P48566	BMT6	YLR063W	1098 nt		11.63	□□□□□ -0.55
MSB3	P48566	EAF3	YPR023C	1206 nt		11.63	□□□□□ -0.55
MSB3	P48566	FUB1	YCR076C	753 nt		11.62	□□□□□ -0.55
MSB3	P48566	SHY1	YGR112W	1170 nt		11.62	□□□□□ -0.55
MSB3	P48566	CDD1	YLR245C	429 nt		11.62	□□□□□ -0.55
MSB3	P48566	SEC61	YLR378C	1443 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)D	tA(AGC)D	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)F	tA(AGC)F	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)G	tA(AGC)G	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)H	tA(AGC)H	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)J	tA(AGC)J	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)K1	tA(AGC)K1	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)K2	tA(AGC)K2	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)L	tA(AGC)L	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)M1	tA(AGC)M1	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)M2	tA(AGC)M2	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	tA(AGC)P	tA(AGC)P	73 nt		11.61	□□□□□ -0.55
MSB3	P48566	YNL024C	YNL024C	741 nt		11.61	□□□□□ -0.55
MSB3	P48566	YCR025C	YCR025C	411 nt		11.6	□□□□□ -0.55
MSB3	P48566	SAM2	YDR502C	1155 nt		11.6	□□□□□ -0.55
MSB3	P48566	VAR1	Q0140	1197 nt		11.6	□□□□□ -0.55
MSB3	P48566	IPL1	YPL209C	1104 nt		11.6	□□□□□ -0.55
MSB3	P48566	SWM1	YDR260C	513 nt		11.58	□□□□□ -0.56
MSB3	P48566	OXA1	YER154W	1209 nt		11.58	□□□□□ -0.56
MSB3	P48566	YER188W	YER188W	720 nt		11.57	□□□□□ -0.56
MSB3	P48566	LYS20	YDL182W	1287 nt		11.56	□□□□□ -0.56
MSB3	P48566	NAS2	YIL007C	663 nt		11.56	□□□□□ -0.56
MSB3	P48566	TMA23	YMR269W	636 nt		11.56	□□□□□ -0.56
MSB3	P48566	ACO2	YJL200C	2370 nt		11.54	□□□□□ -0.56
MSB3	P48566	DDI1	YER143W	1287 nt		11.54	□□□□□ -0.56
MSB3	P48566	OYE3	YPL171C	1203 nt		11.54	□□□□□ -0.56
MSB3	P48566	YDR509W	YDR509W	348 nt		11.52	□□□□□ -0.57
MSB3	P48566	SNF1	YDR477W	1902 nt		11.52	□□□□□ -0.57
MSB3	P48566	BUR6	YER159C	429 nt		11.48	□□□□□ -0.57
MSB3	P48566	SPS100	YHR139C	981 nt		11.48	□□□□□ -0.57
MSB3	P48566	URA6	YKL024C	615 nt		11.48	□□□□□ -0.57
MSB3	P48566	FLR1	YBR008C	1647 nt		11.48	□□□□□ -0.57
MSB3	P48566	DLD2	YDL178W	1593 nt		11.47	□□□□□ -0.57
MSB3	P48566	IMO32	YGR031W	1029 nt		11.47	□□□□□ -0.57
MSB3	P48566	YFR036W-A	YFR036W-A	651 nt		11.46	□□□□□ -0.57
MSB3	P48566	LSM5	YER146W	282 nt		11.45	□□□□□ -0.58
MSB3	P48566	FLX1	YIL134W	936 nt		11.45	□□□□□ -0.58
MSB3	P48566	PET8	YNL003C	855 nt		11.42	□□□□□ -0.58
MSB3	P48566	SOL2	YCR073W-A	948 nt		11.4	□□□□□ -0.58
MSB3	P48566	OSH7	YHR001W	1314 nt		11.39	□□□□□ -0.59
MSB3	P48566	YMR007W	YMR007W	381 nt		11.39	□□□□□ -0.59
MSB3	P48566	BMT5	YIL096C	1011 nt		11.38	□□□□□ -0.59

Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms