Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 HIF1YLL022C 1158 nt10.89□□□□□ -0.67
MSH4P40965 PRY1YJL079C 900 nt10.88□□□□□ -0.67
MSH4P40965 VRG4YGL225W 1014 nt10.87□□□□□ -0.67
MSH4P40965 DBP1YPL119C 1854 nt10.86□□□□□ -0.67
MSH4P40965 LIP1YMR298W 453 nt10.85□□□□□ -0.67
MSH4P40965 YGL114WYGL114W 2178 nt10.84□□□□□ -0.67
MSH4P40965 UGA4YDL210W 1716 nt10.82□□□□□ -0.68
MSH4P40965 HXT1YHR094C 1713 nt10.81□□□□□ -0.68
MSH4P40965 HXT12YIL170W 1374 nt10.8□□□□□ -0.68
MSH4P40965 YPL251WYPL251W 303 nt10.8□□□□□ -0.68
MSH4P40965 YBL086CYBL086C 1401 nt10.8□□□□□ -0.68
MSH4P40965 RPC82YPR190C 1965 nt10.79□□□□□ -0.68
MSH4P40965 YJL055WYJL055W 738 nt10.78□□□□□ -0.68
MSH4P40965 SEN2YLR105C 1134 nt10.77□□□□□ -0.69
MSH4P40965 GID7YCL039W 2238 nt10.77□□□□□ -0.69
MSH4P40965 HMG2YLR450W 3138 nt10.76□□□□□ -0.69
MSH4P40965 NAP1YKR048C 1254 nt10.75□□□□□ -0.69
MSH4P40965 TPO4YOR273C 1980 nt10.75□□□□□ -0.69
MSH4P40965 LEU9YOR108W 1815 nt10.74□□□□□ -0.69
MSH4P40965 PAU5YFL020C 369 nt10.73□□□□□ -0.69
MSH4P40965 BRR1YPR057W 1026 nt10.73□□□□□ -0.69
MSH4P40965 MEP3YPR138C 1470 nt10.73□□□□□ -0.69
MSH4P40965 TOA2YKL058W 369 nt10.71□□□□□ -0.69
MSH4P40965 YMR103CYMR103C 363 nt10.7□□□□□ -0.7
MSH4P40965 LSB5YCL034W 1065 nt10.7□□□□□ -0.7
MSH4P40965 SHY1YGR112W 1170 nt10.68□□□□□ -0.7
MSH4P40965 ACO2YJL200C 2370 nt10.68□□□□□ -0.7
MSH4P40965 INA1YLR413W 2028 nt10.67□□□□□ -0.7
MSH4P40965 PGC1YPL206C 966 nt10.67□□□□□ -0.7
MSH4P40965 CCT5YJR064W 1689 nt10.66□□□□□ -0.7
MSH4P40965 NUC1YJL208C 990 nt10.65□□□□□ -0.7
MSH4P40965 UFO1YML088W 2007 nt10.65□□□□□ -0.71
MSH4P40965 STP3YLR375W 1032 nt10.64□□□□□ -0.71
MSH4P40965 SSN3YPL042C 1668 nt10.63□□□□□ -0.71
MSH4P40965 CSM1YCR086W 573 nt10.63□□□□□ -0.71
MSH4P40965 TAF13YML098W 504 nt10.63□□□□□ -0.71
MSH4P40965 PUP1YOR157C 786 nt10.63□□□□□ -0.71
MSH4P40965 GND2YGR256W 1479 nt10.62□□□□□ -0.71
MSH4P40965 THI72YOR192C 1800 nt10.62□□□□□ -0.71
MSH4P40965 ZRT3YKL175W 1512 nt10.62□□□□□ -0.71
MSH4P40965 TRT2tT(CGU)K 72 nt10.61□□□□□ -0.71
MSH4P40965 YBR232CYBR232C 360 nt10.61□□□□□ -0.71
MSH4P40965 YJL118WYJL118W 660 nt10.6□□□□□ -0.71
MSH4P40965 RIB7YBR153W 735 nt10.6□□□□□ -0.71
MSH4P40965 MUP1YGR055W 1725 nt10.6□□□□□ -0.71
MSH4P40965 RPT5YOR117W 1305 nt10.58□□□□□ -0.71
MSH4P40965 SAM2YDR502C 1155 nt10.58□□□□□ -0.72
MSH4P40965 URA6YKL024C 615 nt10.58□□□□□ -0.72
MSH4P40965 YJL067WYJL067W 351 nt10.57□□□□□ -0.72
MSH4P40965 YJL064WYJL064W 396 nt10.56□□□□□ -0.72
MSH4P40965 GAL3YDR009W 1563 nt10.56□□□□□ -0.72
MSH4P40965 URA8YJR103W 1737 nt10.55□□□□□ -0.72
MSH4P40965 BNI5YNL166C 1347 nt10.55□□□□□ -0.72
MSH4P40965 OYE3YPL171C 1203 nt10.54□□□□□ -0.72
MSH4P40965 BSP1YPR171W 1731 nt10.54□□□□□ -0.72
MSH4P40965 PHO23YNL097C 993 nt10.53□□□□□ -0.72
MSH4P40965 MSC1YML128C 1542 nt10.5□□□□□ -0.73
MSH4P40965 PAU19YMR325W 375 nt10.5□□□□□ -0.73
MSH4P40965 SEC61YLR378C 1443 nt10.5□□□□□ -0.73
MSH4P40965 SAM3YPL274W 1764 nt10.49□□□□□ -0.73
MSH4P40965 OXA1YER154W 1209 nt10.48□□□□□ -0.73
MSH4P40965 YMR262WYMR262W 942 nt10.48□□□□□ -0.73
MSH4P40965 PET8YNL003C 855 nt10.48□□□□□ -0.73
MSH4P40965 CSM2YIL132C 642 nt10.47□□□□□ -0.73
MSH4P40965 RAS2YNL098C 969 nt10.46□□□□□ -0.73
MSH4P40965 HOL1YNR055C 1761 nt10.46□□□□□ -0.74
MSH4P40965 Q0010Q0010 387 nt10.45□□□□□ -0.74
MSH4P40965 TIM44YIL022W 1296 nt10.44□□□□□ -0.74
MSH4P40965 SNZ1YMR096W 894 nt10.44□□□□□ -0.74
MSH4P40965 TPS1YBR126C 1488 nt10.43□□□□□ -0.74
MSH4P40965 PAR32YDL173W 888 nt10.43□□□□□ -0.74
MSH4P40965 OYE2YHR179W 1203 nt10.43□□□□□ -0.74
MSH4P40965 POT1YIL160C 1254 nt10.43□□□□□ -0.74
MSH4P40965 FUB1YCR076C 753 nt10.42□□□□□ -0.74
MSH4P40965 YDR510C-AYDR510C-A 117 nt10.42□□□□□ -0.74
MSH4P40965 YER188WYER188W 720 nt10.42□□□□□ -0.74
MSH4P40965 SLG1YOR008C 1137 nt10.42□□□□□ -0.74
MSH4P40965 FLR1YBR008C 1647 nt10.42□□□□□ -0.74
MSH4P40965 MHF1YOL086W-A 273 nt10.41□□□□□ -0.74
MSH4P40965 GSF2YML048W 1212 nt10.4□□□□□ -0.74
MSH4P40965 YOR325WYOR325W 474 nt10.4□□□□□ -0.74
MSH4P40965 DLD2YDL178W 1593 nt10.39□□□□□ -0.75
MSH4P40965 FMS1YMR020W 1527 nt10.38□□□□□ -0.75
MSH4P40965 CTI6YPL181W 1521 nt10.38□□□□□ -0.75
MSH4P40965 RSC8YFR037C 1674 nt10.38□□□□□ -0.75
MSH4P40965 TUB4YLR212C 1422 nt10.37□□□□□ -0.75
MSH4P40965 TIP1YBR067C 633 nt10.37□□□□□ -0.75
MSH4P40965 YPR126CYPR126C 309 nt10.37□□□□□ -0.75
MSH4P40965 YPS3YLR121C 1527 nt10.37□□□□□ -0.75
MSH4P40965 IML3YBR107C 738 nt10.36□□□□□ -0.75
MSH4P40965 YJR154WYJR154W 1041 nt10.35□□□□□ -0.75
MSH4P40965 YNL024CYNL024C 741 nt10.35□□□□□ -0.75
MSH4P40965 ILV3YJR016C 1758 nt10.34□□□□□ -0.75
MSH4P40965 ILV2YMR108W 2064 nt10.34□□□□□ -0.75
MSH4P40965 YHL008CYHL008C 1884 nt10.34□□□□□ -0.75
MSH4P40965 ESBP6YNL125C 2022 nt10.33□□□□□ -0.76
MSH4P40965 GTB1YDR221W 2109 nt10.33□□□□□ -0.76
MSH4P40965 CWC15YDR163W 528 nt10.33□□□□□ -0.76
MSH4P40965 SPP2YOR148C 558 nt10.33□□□□□ -0.76
MSH4P40965 EAF3YPR023C 1206 nt10.33□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 44.2 ms