Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.92■□□□□ 0.94
CD28P10747 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD28P10747 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD28P10747 DUX4L29-201ENST00000425409 679 ntBASIC20.91■□□□□ 0.94
CD28P10747 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.91■□□□□ 0.94
CD28P10747 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD28P10747 HLA-V-202ENST00000446817 847 ntBASIC20.9■□□□□ 0.94
CD28P10747 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.9■□□□□ 0.94
CD28P10747 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.89■□□□□ 0.93
CD28P10747 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD28P10747 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD28P10747 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD28P10747 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD28P10747 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD28P10747 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD28P10747 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.87■□□□□ 0.93
CD28P10747 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD28P10747 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD28P10747 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CD28P10747 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD28P10747 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD28P10747 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD28P10747 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD28P10747 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.85■□□□□ 0.93
CD28P10747 AC021231.2-201ENST00000594613 730 ntBASIC20.85■□□□□ 0.93
CD28P10747 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD28P10747 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD28P10747 AC108673.1-201ENST00000510422 1159 ntBASIC20.84■□□□□ 0.93
CD28P10747 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CD28P10747 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD28P10747 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD28P10747 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD28P10747 MIR6090-201ENST00000622481 60 ntBASIC20.83■□□□□ 0.93
CD28P10747 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CD28P10747 AC120057.4-201ENST00000624722 1615 ntBASIC20.82■□□□□ 0.92
CD28P10747 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD28P10747 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD28P10747 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD28P10747 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD28P10747 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.8■□□□□ 0.92
CD28P10747 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD28P10747 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.8■□□□□ 0.92
CD28P10747 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.8■□□□□ 0.92
CD28P10747 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CD28P10747 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD28P10747 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.78■□□□□ 0.92
CD28P10747 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.78■□□□□ 0.92
CD28P10747 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD28P10747 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD28P10747 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.76■□□□□ 0.91
CD28P10747 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.76■□□□□ 0.91
CD28P10747 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.75■□□□□ 0.91
CD28P10747 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.75■□□□□ 0.91
CD28P10747 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD28P10747 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD28P10747 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.75■□□□□ 0.91
CD28P10747 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CD28P10747 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD28P10747 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CD28P10747 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD28P10747 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD28P10747 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD28P10747 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CD28P10747 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CD28P10747 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD28P10747 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD28P10747 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CD28P10747 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.69■□□□□ 0.9
CD28P10747 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD28P10747 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.68■□□□□ 0.9
CD28P10747 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CD28P10747 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.68■□□□□ 0.9
CD28P10747 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CD28P10747 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD28P10747 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.68■□□□□ 0.9
CD28P10747 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CD28P10747 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.67■□□□□ 0.9
CD28P10747 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CD28P10747 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CD28P10747 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD28P10747 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.66■□□□□ 0.9
CD28P10747 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CD28P10747 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD28P10747 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.65■□□□□ 0.9
CD28P10747 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD28P10747 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CD28P10747 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD28P10747 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD28P10747 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CD28P10747 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CD28P10747 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.62■□□□□ 0.89
CD28P10747 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CD28P10747 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CD28P10747 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
CD28P10747 DUX4L11-201ENST00000611504 1267 ntBASIC20.6■□□□□ 0.89
CD28P10747 DUX4L12-201ENST00000614593 1267 ntBASIC20.6■□□□□ 0.89
CD28P10747 DUX4L14-201ENST00000621227 1267 ntBASIC20.6■□□□□ 0.89
CD28P10747 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CD28P10747 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.59■□□□□ 0.89
CD28P10747 AC016575.1-201ENST00000607026 382 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms