Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CHRNA1P02708 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.6■■■□□ 2.33
CHRNA1P02708 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CHRNA1P02708 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CHRNA1P02708 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CHRNA1P02708 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CHRNA1P02708 AC021231.2-201ENST00000594613 730 ntBASIC29.58■■■□□ 2.33
CHRNA1P02708 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CHRNA1P02708 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.56■■■□□ 2.32
CHRNA1P02708 MIR6090-201ENST00000622481 60 ntBASIC29.56■■■□□ 2.32
CHRNA1P02708 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CHRNA1P02708 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CHRNA1P02708 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.54■■■□□ 2.32
CHRNA1P02708 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.54■■■□□ 2.32
CHRNA1P02708 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.54■■■□□ 2.32
CHRNA1P02708 AC108673.1-201ENST00000510422 1159 ntBASIC29.52■■■□□ 2.32
CHRNA1P02708 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CHRNA1P02708 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
CHRNA1P02708 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CHRNA1P02708 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
CHRNA1P02708 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CHRNA1P02708 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.5■■■□□ 2.31
CHRNA1P02708 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CHRNA1P02708 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CHRNA1P02708 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
CHRNA1P02708 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.49■■■□□ 2.31
CHRNA1P02708 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
CHRNA1P02708 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHRNA1P02708 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CHRNA1P02708 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHRNA1P02708 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CHRNA1P02708 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHRNA1P02708 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHRNA1P02708 AC120057.4-201ENST00000624722 1615 ntBASIC29.43■■■□□ 2.3
CHRNA1P02708 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHRNA1P02708 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.43■■■□□ 2.3
CHRNA1P02708 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHRNA1P02708 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHRNA1P02708 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
CHRNA1P02708 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.43■■■□□ 2.3
CHRNA1P02708 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.42■■■□□ 2.3
CHRNA1P02708 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
CHRNA1P02708 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.41■■■□□ 2.3
CHRNA1P02708 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CHRNA1P02708 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.39■■■□□ 2.3
CHRNA1P02708 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
CHRNA1P02708 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CHRNA1P02708 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.38■■■□□ 2.29
CHRNA1P02708 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
CHRNA1P02708 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
CHRNA1P02708 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC29.34■■■□□ 2.29
CHRNA1P02708 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHRNA1P02708 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.34■■■□□ 2.29
CHRNA1P02708 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHRNA1P02708 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
CHRNA1P02708 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.33■■■□□ 2.29
CHRNA1P02708 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
CHRNA1P02708 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.32■■■□□ 2.28
CHRNA1P02708 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CHRNA1P02708 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
CHRNA1P02708 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
CHRNA1P02708 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
CHRNA1P02708 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC29.29■■■□□ 2.28
CHRNA1P02708 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CHRNA1P02708 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.28■■■□□ 2.28
CHRNA1P02708 MIR639-201ENST00000384974 98 ntBASIC29.27■■■□□ 2.28
CHRNA1P02708 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CHRNA1P02708 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHRNA1P02708 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
CHRNA1P02708 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.26■■■□□ 2.27
CHRNA1P02708 MIR4449-201ENST00000578365 66 ntBASIC29.26■■■□□ 2.27
CHRNA1P02708 MIR3648-2-201ENST00000581792 180 ntBASIC29.26■■■□□ 2.27
CHRNA1P02708 MIR3648-1-201ENST00000615959 180 ntBASIC29.26■■■□□ 2.27
CHRNA1P02708 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHRNA1P02708 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHRNA1P02708 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC29.24■■■□□ 2.27
CHRNA1P02708 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CHRNA1P02708 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.23■■■□□ 2.27
CHRNA1P02708 AC016575.1-201ENST00000607026 382 ntBASIC29.23■■■□□ 2.27
CHRNA1P02708 DUX4L11-201ENST00000611504 1267 ntBASIC29.23■■■□□ 2.27
CHRNA1P02708 DUX4L12-201ENST00000614593 1267 ntBASIC29.23■■■□□ 2.27
CHRNA1P02708 LINC01971-201ENST00000617888 1048 ntBASIC29.23■■■□□ 2.27
CHRNA1P02708 DUX4L14-201ENST00000621227 1267 ntBASIC29.23■■■□□ 2.27
CHRNA1P02708 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.23■■■□□ 2.27
CHRNA1P02708 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHRNA1P02708 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.21■■■□□ 2.27
CHRNA1P02708 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CHRNA1P02708 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHRNA1P02708 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHRNA1P02708 CR559946.2-201ENST00000623684 991 ntBASIC29.17■■■□□ 2.26
CHRNA1P02708 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHRNA1P02708 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
CHRNA1P02708 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.16■■■□□ 2.26
CHRNA1P02708 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
CHRNA1P02708 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CHRNA1P02708 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.25
CHRNA1P02708 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CHRNA1P02708 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
CHRNA1P02708 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CHRNA1P02708 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms