Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
PFDN1O60925 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PFDN1O60925 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.17■■□□□ 1.46
PFDN1O60925 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PFDN1O60925 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.16■■□□□ 1.46
PFDN1O60925 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PFDN1O60925 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PFDN1O60925 AC142086.6-201ENST00000621154 1765 ntBASIC24.15■■□□□ 1.46
PFDN1O60925 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.14■■□□□ 1.45
PFDN1O60925 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PFDN1O60925 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.14■■□□□ 1.45
PFDN1O60925 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.13■■□□□ 1.45
PFDN1O60925 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PFDN1O60925 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
PFDN1O60925 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PFDN1O60925 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PFDN1O60925 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PFDN1O60925 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PFDN1O60925 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PFDN1O60925 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PFDN1O60925 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PFDN1O60925 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
PFDN1O60925 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PFDN1O60925 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
PFDN1O60925 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.08■■□□□ 1.45
PFDN1O60925 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PFDN1O60925 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PFDN1O60925 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PFDN1O60925 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PFDN1O60925 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
PFDN1O60925 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PFDN1O60925 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
PFDN1O60925 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PFDN1O60925 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PFDN1O60925 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PFDN1O60925 AL121749.1-202ENST00000609313 2153 ntBASIC24.05■■□□□ 1.44
PFDN1O60925 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PFDN1O60925 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PFDN1O60925 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.03■■□□□ 1.44
PFDN1O60925 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PFDN1O60925 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PFDN1O60925 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PFDN1O60925 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PFDN1O60925 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PFDN1O60925 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PFDN1O60925 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24■■□□□ 1.43
PFDN1O60925 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
PFDN1O60925 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PFDN1O60925 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PFDN1O60925 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.98■■□□□ 1.43
PFDN1O60925 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PFDN1O60925 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PFDN1O60925 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
PFDN1O60925 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PFDN1O60925 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.97■■□□□ 1.43
PFDN1O60925 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PFDN1O60925 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PFDN1O60925 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.95■■□□□ 1.43
PFDN1O60925 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
PFDN1O60925 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PFDN1O60925 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.95■■□□□ 1.42
PFDN1O60925 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PFDN1O60925 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PFDN1O60925 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PFDN1O60925 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PFDN1O60925 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PFDN1O60925 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PFDN1O60925 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PFDN1O60925 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PFDN1O60925 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PFDN1O60925 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.92■■□□□ 1.42
PFDN1O60925 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
PFDN1O60925 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PFDN1O60925 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
PFDN1O60925 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.91■■□□□ 1.42
PFDN1O60925 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PFDN1O60925 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PFDN1O60925 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
PFDN1O60925 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PFDN1O60925 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PFDN1O60925 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.88■■□□□ 1.41
PFDN1O60925 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PFDN1O60925 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PFDN1O60925 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PFDN1O60925 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PFDN1O60925 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PFDN1O60925 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PFDN1O60925 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PFDN1O60925 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PFDN1O60925 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PFDN1O60925 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PFDN1O60925 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.85■■□□□ 1.41
PFDN1O60925 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PFDN1O60925 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PFDN1O60925 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PFDN1O60925 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
PFDN1O60925 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PFDN1O60925 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PFDN1O60925 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PFDN1O60925 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms