Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.5■■■□□ 2.15
TBC1D4O60343 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TBC1D4O60343 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TBC1D4O60343 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.49■■■□□ 2.15
TBC1D4O60343 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.49■■■□□ 2.15
TBC1D4O60343 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.49■■■□□ 2.15
TBC1D4O60343 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.49■■■□□ 2.15
TBC1D4O60343 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
TBC1D4O60343 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
TBC1D4O60343 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TBC1D4O60343 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
TBC1D4O60343 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.46■■■□□ 2.15
TBC1D4O60343 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
TBC1D4O60343 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TBC1D4O60343 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TBC1D4O60343 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TBC1D4O60343 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TBC1D4O60343 ZNRF2P2-203ENST00000454624 420 ntBASIC28.43■■■□□ 2.14
TBC1D4O60343 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TBC1D4O60343 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TBC1D4O60343 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.42■■■□□ 2.14
TBC1D4O60343 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TBC1D4O60343 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.41■■■□□ 2.14
TBC1D4O60343 MIR6090-201ENST00000622481 60 ntBASIC28.41■■■□□ 2.14
TBC1D4O60343 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TBC1D4O60343 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.4■■■□□ 2.14
TBC1D4O60343 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TBC1D4O60343 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TBC1D4O60343 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TBC1D4O60343 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.39■■■□□ 2.14
TBC1D4O60343 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TBC1D4O60343 AC108673.1-201ENST00000510422 1159 ntBASIC28.38■■■□□ 2.13
TBC1D4O60343 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.38■■■□□ 2.13
TBC1D4O60343 DUX4L29-201ENST00000425409 679 ntBASIC28.37■■■□□ 2.13
TBC1D4O60343 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.37■■■□□ 2.13
TBC1D4O60343 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TBC1D4O60343 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TBC1D4O60343 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.36■■■□□ 2.13
TBC1D4O60343 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TBC1D4O60343 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TBC1D4O60343 AC021231.2-201ENST00000594613 730 ntBASIC28.35■■■□□ 2.13
TBC1D4O60343 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
TBC1D4O60343 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
TBC1D4O60343 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
TBC1D4O60343 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TBC1D4O60343 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
TBC1D4O60343 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TBC1D4O60343 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TBC1D4O60343 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.31■■■□□ 2.12
TBC1D4O60343 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TBC1D4O60343 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
TBC1D4O60343 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TBC1D4O60343 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TBC1D4O60343 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.29■■■□□ 2.12
TBC1D4O60343 HLA-V-202ENST00000446817 847 ntBASIC28.29■■■□□ 2.12
TBC1D4O60343 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.28■■■□□ 2.12
TBC1D4O60343 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TBC1D4O60343 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
TBC1D4O60343 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TBC1D4O60343 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TBC1D4O60343 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.26■■■□□ 2.11
TBC1D4O60343 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TBC1D4O60343 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.25■■■□□ 2.11
TBC1D4O60343 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.25■■■□□ 2.11
TBC1D4O60343 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
TBC1D4O60343 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.24■■■□□ 2.11
TBC1D4O60343 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TBC1D4O60343 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TBC1D4O60343 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TBC1D4O60343 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TBC1D4O60343 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TBC1D4O60343 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TBC1D4O60343 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TBC1D4O60343 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TBC1D4O60343 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
TBC1D4O60343 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TBC1D4O60343 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
TBC1D4O60343 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TBC1D4O60343 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
TBC1D4O60343 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TBC1D4O60343 AL161658.1-201ENST00000623641 1967 ntBASIC28.19■■■□□ 2.1
TBC1D4O60343 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
TBC1D4O60343 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.18■■■□□ 2.1
TBC1D4O60343 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
TBC1D4O60343 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TBC1D4O60343 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.16■■■□□ 2.1
TBC1D4O60343 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TBC1D4O60343 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TBC1D4O60343 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TBC1D4O60343 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TBC1D4O60343 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TBC1D4O60343 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TBC1D4O60343 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.14■■■□□ 2.1
TBC1D4O60343 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.13■■■□□ 2.09
TBC1D4O60343 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
TBC1D4O60343 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TBC1D4O60343 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
TBC1D4O60343 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.12■■■□□ 2.09
TBC1D4O60343 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.11■■■□□ 2.09
TBC1D4O60343 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms