Protein–RNA interactions for Protein: O15164

TRIM24, Transcription intermediary factor 1-alpha, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24O15164 AC120057.4-201ENST00000624722 1615 ntBASIC27.57■■■□□ 2
TRIM24O15164 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.57■■■□□ 2
TRIM24O15164 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.57■■■□□ 2
TRIM24O15164 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
TRIM24O15164 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.56■■■□□ 2
TRIM24O15164 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.56■■■□□ 2
TRIM24O15164 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
TRIM24O15164 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
TRIM24O15164 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.55■■■□□ 2
TRIM24O15164 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC27.55■■■□□ 2
TRIM24O15164 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.54■■■□□ 2
TRIM24O15164 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TRIM24O15164 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.54■■■□□ 2
TRIM24O15164 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TRIM24O15164 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TRIM24O15164 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.53■■■□□ 2
TRIM24O15164 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TRIM24O15164 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.53■■■□□ 2
TRIM24O15164 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.52■■■□□ 2
TRIM24O15164 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
TRIM24O15164 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.5■■□□□ 1.99
TRIM24O15164 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.5■■□□□ 1.99
TRIM24O15164 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.5■■□□□ 1.99
TRIM24O15164 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
TRIM24O15164 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
TRIM24O15164 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
TRIM24O15164 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.48■■□□□ 1.99
TRIM24O15164 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
TRIM24O15164 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
TRIM24O15164 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.47■■□□□ 1.99
TRIM24O15164 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
TRIM24O15164 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
TRIM24O15164 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
TRIM24O15164 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.45■■□□□ 1.98
TRIM24O15164 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.45■■□□□ 1.98
TRIM24O15164 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TRIM24O15164 ZNRF2P2-203ENST00000454624 420 ntBASIC27.44■■□□□ 1.98
TRIM24O15164 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TRIM24O15164 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.43■■□□□ 1.98
TRIM24O15164 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
TRIM24O15164 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.42■■□□□ 1.98
TRIM24O15164 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.42■■□□□ 1.98
TRIM24O15164 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
TRIM24O15164 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM24O15164 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRIM24O15164 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.41■■□□□ 1.98
TRIM24O15164 MIR6090-201ENST00000622481 60 ntBASIC27.41■■□□□ 1.98
TRIM24O15164 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.41■■□□□ 1.98
TRIM24O15164 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TRIM24O15164 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TRIM24O15164 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TRIM24O15164 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
TRIM24O15164 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TRIM24O15164 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TRIM24O15164 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.37■■□□□ 1.97
TRIM24O15164 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TRIM24O15164 DUX4L29-201ENST00000425409 679 ntBASIC27.35■■□□□ 1.97
TRIM24O15164 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM24O15164 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM24O15164 AC021231.2-201ENST00000594613 730 ntBASIC27.35■■□□□ 1.97
TRIM24O15164 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM24O15164 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
TRIM24O15164 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC27.33■■□□□ 1.97
TRIM24O15164 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.33■■□□□ 1.97
TRIM24O15164 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.33■■□□□ 1.97
TRIM24O15164 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM24O15164 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.32■■□□□ 1.96
TRIM24O15164 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
TRIM24O15164 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRIM24O15164 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRIM24O15164 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRIM24O15164 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TRIM24O15164 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.3■■□□□ 1.96
TRIM24O15164 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.3■■□□□ 1.96
TRIM24O15164 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM24O15164 AC108673.1-201ENST00000510422 1159 ntBASIC27.29■■□□□ 1.96
TRIM24O15164 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.29■■□□□ 1.96
TRIM24O15164 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM24O15164 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
TRIM24O15164 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.96
TRIM24O15164 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRIM24O15164 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRIM24O15164 AL161658.1-201ENST00000623641 1967 ntBASIC27.25■■□□□ 1.95
TRIM24O15164 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
TRIM24O15164 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRIM24O15164 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRIM24O15164 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRIM24O15164 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.24■■□□□ 1.95
TRIM24O15164 HLA-V-202ENST00000446817 847 ntBASIC27.24■■□□□ 1.95
TRIM24O15164 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRIM24O15164 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
TRIM24O15164 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.23■■□□□ 1.95
TRIM24O15164 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRIM24O15164 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRIM24O15164 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRIM24O15164 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TRIM24O15164 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.21■■□□□ 1.95
TRIM24O15164 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
TRIM24O15164 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TRIM24O15164 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms