Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Rfpl4bJ3QPR6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Rfpl4bJ3QPR6 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.07■■■□□ 2.24
Rfpl4bJ3QPR6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Rfpl4bJ3QPR6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Rfpl4bJ3QPR6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
Rfpl4bJ3QPR6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Rfpl4bJ3QPR6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rfpl4bJ3QPR6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.05■■■□□ 2.24
Rfpl4bJ3QPR6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Rfpl4bJ3QPR6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
Rfpl4bJ3QPR6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.04■■■□□ 2.24
Rfpl4bJ3QPR6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.04■■■□□ 2.24
Rfpl4bJ3QPR6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.03■■■□□ 2.24
Rfpl4bJ3QPR6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.02■■■□□ 2.24
Rfpl4bJ3QPR6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.02■■■□□ 2.24
Rfpl4bJ3QPR6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Rfpl4bJ3QPR6 Nkain2-201ENSMUST00000092602 558 ntBASIC29.01■■■□□ 2.23
Rfpl4bJ3QPR6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Rfpl4bJ3QPR6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
Rfpl4bJ3QPR6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Rfpl4bJ3QPR6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.98■■■□□ 2.23
Rfpl4bJ3QPR6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rfpl4bJ3QPR6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
Rfpl4bJ3QPR6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rfpl4bJ3QPR6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Rfpl4bJ3QPR6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Rfpl4bJ3QPR6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Rfpl4bJ3QPR6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.96■■■□□ 2.23
Rfpl4bJ3QPR6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
Rfpl4bJ3QPR6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rfpl4bJ3QPR6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rfpl4bJ3QPR6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.91■■■□□ 2.22
Rfpl4bJ3QPR6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.91■■■□□ 2.22
Rfpl4bJ3QPR6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Rfpl4bJ3QPR6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.21
Rfpl4bJ3QPR6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Rfpl4bJ3QPR6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Rfpl4bJ3QPR6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Rfpl4bJ3QPR6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
Rfpl4bJ3QPR6 Gm7432-201ENSMUST00000210343 879 ntBASIC28.86■■■□□ 2.21
Rfpl4bJ3QPR6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.85■■■□□ 2.21
Rfpl4bJ3QPR6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Rfpl4bJ3QPR6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Rfpl4bJ3QPR6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.84■■■□□ 2.21
Rfpl4bJ3QPR6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Rfpl4bJ3QPR6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rfpl4bJ3QPR6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Rfpl4bJ3QPR6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Rfpl4bJ3QPR6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rfpl4bJ3QPR6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rfpl4bJ3QPR6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rfpl4bJ3QPR6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rfpl4bJ3QPR6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
Rfpl4bJ3QPR6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rfpl4bJ3QPR6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rfpl4bJ3QPR6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
Rfpl4bJ3QPR6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Rfpl4bJ3QPR6 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.75■■■□□ 2.19
Rfpl4bJ3QPR6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rfpl4bJ3QPR6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Rfpl4bJ3QPR6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Rfpl4bJ3QPR6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Rfpl4bJ3QPR6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rfpl4bJ3QPR6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
Rfpl4bJ3QPR6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Rfpl4bJ3QPR6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.7■■■□□ 2.18
Rfpl4bJ3QPR6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rfpl4bJ3QPR6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rfpl4bJ3QPR6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Rfpl4bJ3QPR6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Rfpl4bJ3QPR6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Rfpl4bJ3QPR6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rfpl4bJ3QPR6 Gm11599-201ENSMUST00000118720 878 ntBASIC28.64■■■□□ 2.18
Rfpl4bJ3QPR6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.64■■■□□ 2.18
Rfpl4bJ3QPR6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.64■■■□□ 2.18
Rfpl4bJ3QPR6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Rfpl4bJ3QPR6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.63■■■□□ 2.17
Rfpl4bJ3QPR6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rfpl4bJ3QPR6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Rfpl4bJ3QPR6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rfpl4bJ3QPR6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Rfpl4bJ3QPR6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Rfpl4bJ3QPR6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rfpl4bJ3QPR6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.58■■■□□ 2.17
Rfpl4bJ3QPR6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rfpl4bJ3QPR6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rfpl4bJ3QPR6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rfpl4bJ3QPR6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Rfpl4bJ3QPR6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.55■■■□□ 2.16
Rfpl4bJ3QPR6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.55■■■□□ 2.16
Rfpl4bJ3QPR6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rfpl4bJ3QPR6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Rfpl4bJ3QPR6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Rfpl4bJ3QPR6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rfpl4bJ3QPR6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.52■■■□□ 2.16
Rfpl4bJ3QPR6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Rfpl4bJ3QPR6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Rfpl4bJ3QPR6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rfpl4bJ3QPR6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 118.4 ms