Protein–RNA interactions for Protein: A6NEK1

ARRDC5, Arrestin domain-containing protein 5, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC5A6NEK1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ARRDC5A6NEK1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ARRDC5A6NEK1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ARRDC5A6NEK1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ARRDC5A6NEK1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ARRDC5A6NEK1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ARRDC5A6NEK1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ARRDC5A6NEK1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ARRDC5A6NEK1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ARRDC5A6NEK1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ARRDC5A6NEK1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
ARRDC5A6NEK1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ARRDC5A6NEK1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ARRDC5A6NEK1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.39■■□□□ 1.5
ARRDC5A6NEK1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ARRDC5A6NEK1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.38■■□□□ 1.49
ARRDC5A6NEK1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ARRDC5A6NEK1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ARRDC5A6NEK1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ARRDC5A6NEK1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.36■■□□□ 1.49
ARRDC5A6NEK1 AC142086.6-201ENST00000621154 1765 ntBASIC24.35■■□□□ 1.49
ARRDC5A6NEK1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
ARRDC5A6NEK1 AL031258.1-201ENST00000623562 325 ntBASIC24.34■■□□□ 1.49
ARRDC5A6NEK1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
ARRDC5A6NEK1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
ARRDC5A6NEK1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
ARRDC5A6NEK1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
ARRDC5A6NEK1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ARRDC5A6NEK1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ARRDC5A6NEK1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.31■■□□□ 1.48
ARRDC5A6NEK1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ARRDC5A6NEK1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ARRDC5A6NEK1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ARRDC5A6NEK1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.3■■□□□ 1.48
ARRDC5A6NEK1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ARRDC5A6NEK1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ARRDC5A6NEK1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
ARRDC5A6NEK1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
ARRDC5A6NEK1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ARRDC5A6NEK1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC24.26■■□□□ 1.47
ARRDC5A6NEK1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARRDC5A6NEK1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARRDC5A6NEK1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ARRDC5A6NEK1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.25■■□□□ 1.47
ARRDC5A6NEK1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ARRDC5A6NEK1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ARRDC5A6NEK1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.24■■□□□ 1.47
ARRDC5A6NEK1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.24■■□□□ 1.47
ARRDC5A6NEK1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ARRDC5A6NEK1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.23■■□□□ 1.47
ARRDC5A6NEK1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.23■■□□□ 1.47
ARRDC5A6NEK1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
ARRDC5A6NEK1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.2■■□□□ 1.47
ARRDC5A6NEK1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ARRDC5A6NEK1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ARRDC5A6NEK1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ARRDC5A6NEK1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.18■■□□□ 1.46
ARRDC5A6NEK1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ARRDC5A6NEK1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ARRDC5A6NEK1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ARRDC5A6NEK1 AL139393.2-201ENST00000608721 2025 ntBASIC24.17■■□□□ 1.46
ARRDC5A6NEK1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ARRDC5A6NEK1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
ARRDC5A6NEK1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARRDC5A6NEK1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARRDC5A6NEK1 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARRDC5A6NEK1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ARRDC5A6NEK1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARRDC5A6NEK1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARRDC5A6NEK1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ARRDC5A6NEK1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.12■■□□□ 1.45
ARRDC5A6NEK1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ARRDC5A6NEK1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ARRDC5A6NEK1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ARRDC5A6NEK1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.11■■□□□ 1.45
ARRDC5A6NEK1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ARRDC5A6NEK1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.1■■□□□ 1.45
ARRDC5A6NEK1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ARRDC5A6NEK1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ARRDC5A6NEK1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ARRDC5A6NEK1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.1■■□□□ 1.45
ARRDC5A6NEK1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
ARRDC5A6NEK1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ARRDC5A6NEK1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ARRDC5A6NEK1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
ARRDC5A6NEK1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
ARRDC5A6NEK1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ARRDC5A6NEK1 WASH5P-204ENST00000632292 975 ntBASIC24.07■■□□□ 1.44
ARRDC5A6NEK1 DRD5P2-201ENST00000421395 2012 ntBASIC24.06■■□□□ 1.44
ARRDC5A6NEK1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ARRDC5A6NEK1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
ARRDC5A6NEK1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
ARRDC5A6NEK1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARRDC5A6NEK1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARRDC5A6NEK1 AP002365.1-201ENST00000603448 772 ntBASIC24.05■■□□□ 1.44
ARRDC5A6NEK1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARRDC5A6NEK1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARRDC5A6NEK1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.03■■□□□ 1.44
ARRDC5A6NEK1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ARRDC5A6NEK1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms