Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.68■□□□□ 0.74
TRAV12-3A0A0B4J271 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRAV12-3A0A0B4J271 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
TRAV12-3A0A0B4J271 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV12-3A0A0B4J271 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV12-3A0A0B4J271 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRAV12-3A0A0B4J271 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV12-3A0A0B4J271 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
TRAV12-3A0A0B4J271 AL133380.1-201ENST00000506013 324 ntBASIC19.67■□□□□ 0.74
TRAV12-3A0A0B4J271 ABCB10P3-201ENST00000561950 2166 ntBASIC19.67■□□□□ 0.74
TRAV12-3A0A0B4J271 WASH5P-204ENST00000632292 975 ntBASIC19.66■□□□□ 0.74
TRAV12-3A0A0B4J271 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV12-3A0A0B4J271 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV12-3A0A0B4J271 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV12-3A0A0B4J271 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV12-3A0A0B4J271 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV12-3A0A0B4J271 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV12-3A0A0B4J271 ST7-AS1-201ENST00000456775 1889 ntBASIC19.62■□□□□ 0.73
TRAV12-3A0A0B4J271 RARRES2P7-201ENST00000567349 469 ntBASIC19.62■□□□□ 0.73
TRAV12-3A0A0B4J271 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV12-3A0A0B4J271 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV12-3A0A0B4J271 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV12-3A0A0B4J271 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV12-3A0A0B4J271 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV12-3A0A0B4J271 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV12-3A0A0B4J271 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV12-3A0A0B4J271 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV12-3A0A0B4J271 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV12-3A0A0B4J271 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRAV12-3A0A0B4J271 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.6■□□□□ 0.73
TRAV12-3A0A0B4J271 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV12-3A0A0B4J271 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV12-3A0A0B4J271 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV12-3A0A0B4J271 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV12-3A0A0B4J271 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV12-3A0A0B4J271 AC139426.1-201ENST00000568218 2529 ntBASIC19.59■□□□□ 0.73
TRAV12-3A0A0B4J271 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV12-3A0A0B4J271 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRAV12-3A0A0B4J271 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV12-3A0A0B4J271 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV12-3A0A0B4J271 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV12-3A0A0B4J271 AL135925.1-201ENST00000605920 1701 ntBASIC19.56■□□□□ 0.72
TRAV12-3A0A0B4J271 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV12-3A0A0B4J271 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV12-3A0A0B4J271 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV12-3A0A0B4J271 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV12-3A0A0B4J271 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV12-3A0A0B4J271 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV12-3A0A0B4J271 SETD8P1-201ENST00000623146 1180 ntBASIC19.55■□□□□ 0.72
TRAV12-3A0A0B4J271 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRAV12-3A0A0B4J271 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV12-3A0A0B4J271 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV12-3A0A0B4J271 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV12-3A0A0B4J271 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV12-3A0A0B4J271 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV12-3A0A0B4J271 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV12-3A0A0B4J271 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV12-3A0A0B4J271 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV12-3A0A0B4J271 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV12-3A0A0B4J271 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV12-3A0A0B4J271 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV12-3A0A0B4J271 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV12-3A0A0B4J271 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV12-3A0A0B4J271 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV12-3A0A0B4J271 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV12-3A0A0B4J271 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV12-3A0A0B4J271 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV12-3A0A0B4J271 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TRAV12-3A0A0B4J271 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV12-3A0A0B4J271 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV12-3A0A0B4J271 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV12-3A0A0B4J271 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV12-3A0A0B4J271 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV12-3A0A0B4J271 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAV12-3A0A0B4J271 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV12-3A0A0B4J271 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV12-3A0A0B4J271 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV12-3A0A0B4J271 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV12-3A0A0B4J271 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRAV12-3A0A0B4J271 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV12-3A0A0B4J271 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRAV12-3A0A0B4J271 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV12-3A0A0B4J271 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV12-3A0A0B4J271 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV12-3A0A0B4J271 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRAV12-3A0A0B4J271 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRAV12-3A0A0B4J271 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV12-3A0A0B4J271 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRAV12-3A0A0B4J271 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV12-3A0A0B4J271 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV12-3A0A0B4J271 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV12-3A0A0B4J271 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV12-3A0A0B4J271 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAV12-3A0A0B4J271 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV12-3A0A0B4J271 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV12-3A0A0B4J271 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAV12-3A0A0B4J271 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV12-3A0A0B4J271 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRAV12-3A0A0B4J271 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.39■□□□□ 0.7
TRAV12-3A0A0B4J271 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms