Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV20-1A0A075B6N2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBV20-1A0A075B6N2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.02■□□□□ 0.48
TRBV20-1A0A075B6N2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV20-1A0A075B6N2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRBV20-1A0A075B6N2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV20-1A0A075B6N2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRBV20-1A0A075B6N2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV20-1A0A075B6N2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC17.99■□□□□ 0.47
TRBV20-1A0A075B6N2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.99■□□□□ 0.47
TRBV20-1A0A075B6N2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRBV20-1A0A075B6N2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV20-1A0A075B6N2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRBV20-1A0A075B6N2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV20-1A0A075B6N2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV20-1A0A075B6N2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV20-1A0A075B6N2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV20-1A0A075B6N2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV20-1A0A075B6N2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV20-1A0A075B6N2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV20-1A0A075B6N2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV20-1A0A075B6N2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV20-1A0A075B6N2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.96■□□□□ 0.47
TRBV20-1A0A075B6N2 AL121749.1-202ENST00000609313 2153 ntBASIC17.95■□□□□ 0.46
TRBV20-1A0A075B6N2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV20-1A0A075B6N2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV20-1A0A075B6N2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV20-1A0A075B6N2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV20-1A0A075B6N2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC17.92■□□□□ 0.46
TRBV20-1A0A075B6N2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV20-1A0A075B6N2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV20-1A0A075B6N2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV20-1A0A075B6N2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV20-1A0A075B6N2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRBV20-1A0A075B6N2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV20-1A0A075B6N2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRBV20-1A0A075B6N2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV20-1A0A075B6N2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV20-1A0A075B6N2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV20-1A0A075B6N2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRBV20-1A0A075B6N2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV20-1A0A075B6N2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV20-1A0A075B6N2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV20-1A0A075B6N2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRBV20-1A0A075B6N2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV20-1A0A075B6N2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV20-1A0A075B6N2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV20-1A0A075B6N2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV20-1A0A075B6N2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV20-1A0A075B6N2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV20-1A0A075B6N2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV20-1A0A075B6N2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRBV20-1A0A075B6N2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV20-1A0A075B6N2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV20-1A0A075B6N2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV20-1A0A075B6N2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV20-1A0A075B6N2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV20-1A0A075B6N2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRBV20-1A0A075B6N2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV20-1A0A075B6N2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV20-1A0A075B6N2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV20-1A0A075B6N2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
TRBV20-1A0A075B6N2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV20-1A0A075B6N2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV20-1A0A075B6N2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRBV20-1A0A075B6N2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV20-1A0A075B6N2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.81■□□□□ 0.44
TRBV20-1A0A075B6N2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TRBV20-1A0A075B6N2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.8■□□□□ 0.44
TRBV20-1A0A075B6N2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV20-1A0A075B6N2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV20-1A0A075B6N2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TRBV20-1A0A075B6N2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV20-1A0A075B6N2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV20-1A0A075B6N2 AC120057.4-201ENST00000624722 1615 ntBASIC17.79■□□□□ 0.44
TRBV20-1A0A075B6N2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV20-1A0A075B6N2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV20-1A0A075B6N2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV20-1A0A075B6N2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV20-1A0A075B6N2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV20-1A0A075B6N2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV20-1A0A075B6N2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRBV20-1A0A075B6N2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV20-1A0A075B6N2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV20-1A0A075B6N2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV20-1A0A075B6N2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV20-1A0A075B6N2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV20-1A0A075B6N2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV20-1A0A075B6N2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV20-1A0A075B6N2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV20-1A0A075B6N2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.74■□□□□ 0.43
TRBV20-1A0A075B6N2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV20-1A0A075B6N2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV20-1A0A075B6N2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV20-1A0A075B6N2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV20-1A0A075B6N2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV20-1A0A075B6N2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV20-1A0A075B6N2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV20-1A0A075B6N2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV20-1A0A075B6N2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms