Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC32.15■■■□□ 2.74
CDC42BPBQ9Y5S2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC32.15■■■□□ 2.74
CDC42BPBQ9Y5S2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CDC42BPBQ9Y5S2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC32.15■■■□□ 2.74
CDC42BPBQ9Y5S2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 MME-217ENST00000616757 1315 ntTSL 5 BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC32.14■■■□□ 2.74
CDC42BPBQ9Y5S2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 LSM12P1-201ENST00000411836 588 ntBASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 AC233263.1-201ENST00000578059 224 ntBASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 AC100791.3-201ENST00000617619 330 ntBASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 NFE2L3P1-201ENST00000588207 1959 ntBASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
CDC42BPBQ9Y5S2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC32.12■■■□□ 2.73
CDC42BPBQ9Y5S2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC32.12■■■□□ 2.73
CDC42BPBQ9Y5S2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC32.12■■■□□ 2.73
CDC42BPBQ9Y5S2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CDC42BPBQ9Y5S2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC32.12■■■□□ 2.73
CDC42BPBQ9Y5S2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
CDC42BPBQ9Y5S2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC32.12■■■□□ 2.73
CDC42BPBQ9Y5S2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC32.12■■■□□ 2.73
CDC42BPBQ9Y5S2 AC069544.1-201ENST00000609399 999 ntBASIC32.12■■■□□ 2.73
CDC42BPBQ9Y5S2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
CDC42BPBQ9Y5S2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CDC42BPBQ9Y5S2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CDC42BPBQ9Y5S2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CDC42BPBQ9Y5S2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CDC42BPBQ9Y5S2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CDC42BPBQ9Y5S2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CDC42BPBQ9Y5S2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC32.11■■■□□ 2.73
CDC42BPBQ9Y5S2 AC093323.1-202ENST00000635031 2045 ntBASIC32.11■■■□□ 2.73
CDC42BPBQ9Y5S2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CDC42BPBQ9Y5S2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC32.1■■■□□ 2.73
CDC42BPBQ9Y5S2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
CDC42BPBQ9Y5S2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CDC42BPBQ9Y5S2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
CDC42BPBQ9Y5S2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
CDC42BPBQ9Y5S2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CDC42BPBQ9Y5S2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC32.1■■■□□ 2.73
CDC42BPBQ9Y5S2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
CDC42BPBQ9Y5S2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CDC42BPBQ9Y5S2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
CDC42BPBQ9Y5S2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC32.09■■■□□ 2.73
CDC42BPBQ9Y5S2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
CDC42BPBQ9Y5S2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC32.09■■■□□ 2.73
CDC42BPBQ9Y5S2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CDC42BPBQ9Y5S2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CDC42BPBQ9Y5S2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CDC42BPBQ9Y5S2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
CDC42BPBQ9Y5S2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC32.08■■■□□ 2.73
CDC42BPBQ9Y5S2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CDC42BPBQ9Y5S2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC32.08■■■□□ 2.73
CDC42BPBQ9Y5S2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CDC42BPBQ9Y5S2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC32.08■■■□□ 2.73
CDC42BPBQ9Y5S2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC32.08■■■□□ 2.73
CDC42BPBQ9Y5S2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC32.08■■■□□ 2.73
CDC42BPBQ9Y5S2 HLA-B-256ENST00000639848 1089 ntBASIC32.08■■■□□ 2.73
CDC42BPBQ9Y5S2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC32.08■■■□□ 2.73
CDC42BPBQ9Y5S2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
CDC42BPBQ9Y5S2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CDC42BPBQ9Y5S2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CDC42BPBQ9Y5S2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC32.07■■■□□ 2.72
CDC42BPBQ9Y5S2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CDC42BPBQ9Y5S2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CDC42BPBQ9Y5S2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC32.07■■■□□ 2.72
CDC42BPBQ9Y5S2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC32.07■■■□□ 2.72
CDC42BPBQ9Y5S2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 C11orf96-202ENST00000528572 1834 ntBASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC32.06■■■□□ 2.72
CDC42BPBQ9Y5S2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms