Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 AC011767.1-201ENST00000617410 1153 ntBASIC19.38■□□□□ 0.69
HRH3Q9Y5N1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 LINC00565-201ENST00000562710 2331 ntBASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HRH3Q9Y5N1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HRH3Q9Y5N1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HRH3Q9Y5N1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 EEF1DP3-203ENST00000566025 782 ntBASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HRH3Q9Y5N1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HRH3Q9Y5N1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HRH3Q9Y5N1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms