Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGA4Q9Y5G9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGA4Q9Y5G9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGA4Q9Y5G9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.64■□□□□ 0.9
PCDHGA4Q9Y5G9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA4Q9Y5G9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA4Q9Y5G9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGA4Q9Y5G9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHGA4Q9Y5G9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA4Q9Y5G9 CROCCP5-201ENST00000436658 830 ntBASIC20.64■□□□□ 0.89
PCDHGA4Q9Y5G9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA4Q9Y5G9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA4Q9Y5G9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA4Q9Y5G9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGA4Q9Y5G9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA4Q9Y5G9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 KRT19P1-201ENST00000405746 1186 ntBASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA4Q9Y5G9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 AC092053.2-201ENST00000640557 1818 ntBASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGA4Q9Y5G9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 BX005040.4-201ENST00000637145 1518 ntBASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 NCF1B-203ENST00000435988 1254 ntBASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 AL034346.1-201ENST00000568244 1277 ntBASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 AP004607.7-201ENST00000527152 1677 ntBASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA4Q9Y5G9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGA4Q9Y5G9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms