Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGB3Q9Y5G1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 AC027612.3-201ENST00000413684 1047 ntBASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 YBX1P1-201ENST00000445822 960 ntBASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 AC087623.3-201ENST00000607047 1098 ntBASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGB3Q9Y5G1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 AC123595.1-201ENST00000440769 1046 ntBASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGB3Q9Y5G1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 AC092666.2-201ENST00000613287 246 ntBASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGB3Q9Y5G1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 AC105233.4-201ENST00000642045 216 ntBASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 AC009237.3-201ENST00000393279 1427 ntBASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGB3Q9Y5G1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PCDHGB3Q9Y5G1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB3Q9Y5G1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PCDHGB3Q9Y5G1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB3Q9Y5G1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB3Q9Y5G1 AC034268.1-201ENST00000441047 882 ntBASIC19.83■□□□□ 0.77
PCDHGB3Q9Y5G1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB3Q9Y5G1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGB3Q9Y5G1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
PCDHGB3Q9Y5G1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGB3Q9Y5G1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGB3Q9Y5G1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.83■□□□□ 0.76
PCDHGB3Q9Y5G1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGB3Q9Y5G1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGB3Q9Y5G1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGB3Q9Y5G1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGB3Q9Y5G1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms