Protein–RNA interactions for Protein: Q9Y570

PPME1, Protein phosphatase methylesterase 1, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1Q9Y570 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PPME1Q9Y570 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPME1Q9Y570 MIR663A-201ENST00000385250 93 ntBASIC23.27■■□□□ 1.32
PPME1Q9Y570 NCF1B-203ENST00000435988 1254 ntBASIC23.27■■□□□ 1.32
PPME1Q9Y570 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.27■■□□□ 1.32
PPME1Q9Y570 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.27■■□□□ 1.32
PPME1Q9Y570 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.27■■□□□ 1.32
PPME1Q9Y570 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PPME1Q9Y570 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PPME1Q9Y570 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PPME1Q9Y570 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.27■■□□□ 1.32
PPME1Q9Y570 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PPME1Q9Y570 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPME1Q9Y570 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PPME1Q9Y570 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.26■■□□□ 1.31
PPME1Q9Y570 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.26■■□□□ 1.31
PPME1Q9Y570 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
PPME1Q9Y570 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PPME1Q9Y570 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
PPME1Q9Y570 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
PPME1Q9Y570 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPME1Q9Y570 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PPME1Q9Y570 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPME1Q9Y570 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.25■■□□□ 1.31
PPME1Q9Y570 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPME1Q9Y570 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPME1Q9Y570 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.25■■□□□ 1.31
PPME1Q9Y570 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PPME1Q9Y570 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PPME1Q9Y570 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PPME1Q9Y570 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPME1Q9Y570 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.24■■□□□ 1.31
PPME1Q9Y570 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.24■■□□□ 1.31
PPME1Q9Y570 AC245052.3-201ENST00000450182 901 ntBASIC23.24■■□□□ 1.31
PPME1Q9Y570 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPME1Q9Y570 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.24■■□□□ 1.31
PPME1Q9Y570 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPME1Q9Y570 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PPME1Q9Y570 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PPME1Q9Y570 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
PPME1Q9Y570 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPME1Q9Y570 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PPME1Q9Y570 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPME1Q9Y570 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPME1Q9Y570 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPME1Q9Y570 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.23■■□□□ 1.31
PPME1Q9Y570 AC133552.2-202ENST00000575694 574 ntBASIC23.23■■□□□ 1.31
PPME1Q9Y570 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.23■■□□□ 1.31
PPME1Q9Y570 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPME1Q9Y570 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPME1Q9Y570 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PPME1Q9Y570 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PPME1Q9Y570 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PPME1Q9Y570 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.22■■□□□ 1.31
PPME1Q9Y570 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.22■■□□□ 1.31
PPME1Q9Y570 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.22■■□□□ 1.31
PPME1Q9Y570 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.22■■□□□ 1.31
PPME1Q9Y570 AC079834.2-201ENST00000609776 1949 ntBASIC23.22■■□□□ 1.31
PPME1Q9Y570 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.22■■□□□ 1.31
PPME1Q9Y570 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.22■■□□□ 1.31
PPME1Q9Y570 AL121832.2-201ENST00000610979 668 ntBASIC23.22■■□□□ 1.31
PPME1Q9Y570 AL050303.2-201ENST00000619798 666 ntBASIC23.22■■□□□ 1.31
PPME1Q9Y570 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.22■■□□□ 1.31
PPME1Q9Y570 AC068338.2-201ENST00000563278 1430 ntBASIC23.22■■□□□ 1.31
PPME1Q9Y570 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.22■■□□□ 1.31
PPME1Q9Y570 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PPME1Q9Y570 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPME1Q9Y570 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PPME1Q9Y570 AL591742.1-201ENST00000604433 565 ntBASIC23.21■■□□□ 1.31
PPME1Q9Y570 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.21■■□□□ 1.31
PPME1Q9Y570 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.21■■□□□ 1.31
PPME1Q9Y570 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPME1Q9Y570 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
PPME1Q9Y570 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPME1Q9Y570 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PPME1Q9Y570 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPME1Q9Y570 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPME1Q9Y570 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PPME1Q9Y570 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPME1Q9Y570 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPME1Q9Y570 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPME1Q9Y570 GPX1P1-201ENST00000388829 606 ntBASIC23.2■■□□□ 1.3
PPME1Q9Y570 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPME1Q9Y570 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
PPME1Q9Y570 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.2■■□□□ 1.3
PPME1Q9Y570 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.2■■□□□ 1.3
PPME1Q9Y570 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.2■■□□□ 1.3
PPME1Q9Y570 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPME1Q9Y570 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PPME1Q9Y570 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms