Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.11■□□□□ 0.97
PKP3Q9Y446 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PKP3Q9Y446 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PKP3Q9Y446 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PKP3Q9Y446 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.1■□□□□ 0.97
PKP3Q9Y446 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PKP3Q9Y446 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PKP3Q9Y446 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PKP3Q9Y446 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PKP3Q9Y446 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PKP3Q9Y446 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.1■□□□□ 0.97
PKP3Q9Y446 AC026271.2-201ENST00000428091 497 ntBASIC21.1■□□□□ 0.97
PKP3Q9Y446 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.1■□□□□ 0.97
PKP3Q9Y446 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.1■□□□□ 0.97
PKP3Q9Y446 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PKP3Q9Y446 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PKP3Q9Y446 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.1■□□□□ 0.97
PKP3Q9Y446 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.1■□□□□ 0.97
PKP3Q9Y446 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PKP3Q9Y446 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PKP3Q9Y446 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.09■□□□□ 0.97
PKP3Q9Y446 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.09■□□□□ 0.97
PKP3Q9Y446 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.09■□□□□ 0.97
PKP3Q9Y446 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.09■□□□□ 0.97
PKP3Q9Y446 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.09■□□□□ 0.97
PKP3Q9Y446 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.09■□□□□ 0.97
PKP3Q9Y446 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.09■□□□□ 0.97
PKP3Q9Y446 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PKP3Q9Y446 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
PKP3Q9Y446 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
PKP3Q9Y446 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.08■□□□□ 0.97
PKP3Q9Y446 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PKP3Q9Y446 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PKP3Q9Y446 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PKP3Q9Y446 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PKP3Q9Y446 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PKP3Q9Y446 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.08■□□□□ 0.97
PKP3Q9Y446 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.08■□□□□ 0.97
PKP3Q9Y446 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PKP3Q9Y446 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.08■□□□□ 0.97
PKP3Q9Y446 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PKP3Q9Y446 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
PKP3Q9Y446 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PKP3Q9Y446 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PKP3Q9Y446 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
PKP3Q9Y446 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PKP3Q9Y446 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PKP3Q9Y446 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PKP3Q9Y446 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.07■□□□□ 0.96
PKP3Q9Y446 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PKP3Q9Y446 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PKP3Q9Y446 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PKP3Q9Y446 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PKP3Q9Y446 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.07■□□□□ 0.96
PKP3Q9Y446 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PKP3Q9Y446 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.07■□□□□ 0.96
PKP3Q9Y446 AC138907.5-202ENST00000569484 235 ntBASIC21.07■□□□□ 0.96
PKP3Q9Y446 AC104187.1-201ENST00000607510 612 ntBASIC21.07■□□□□ 0.96
PKP3Q9Y446 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PKP3Q9Y446 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.07■□□□□ 0.96
PKP3Q9Y446 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PKP3Q9Y446 AP004607.4-201ENST00000530158 1459 ntBASIC21.07■□□□□ 0.96
PKP3Q9Y446 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.06■□□□□ 0.96
PKP3Q9Y446 AC004854.2-201ENST00000608450 1441 ntBASIC21.06■□□□□ 0.96
PKP3Q9Y446 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PKP3Q9Y446 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKP3Q9Y446 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.06■□□□□ 0.96
PKP3Q9Y446 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.06■□□□□ 0.96
PKP3Q9Y446 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKP3Q9Y446 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.06■□□□□ 0.96
PKP3Q9Y446 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKP3Q9Y446 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.06■□□□□ 0.96
PKP3Q9Y446 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PKP3Q9Y446 MIR5787-201ENST00000611784 55 ntBASIC21.06■□□□□ 0.96
PKP3Q9Y446 AC008175.2-201ENST00000612840 297 ntBASIC21.06■□□□□ 0.96
PKP3Q9Y446 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PKP3Q9Y446 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PKP3Q9Y446 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKP3Q9Y446 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKP3Q9Y446 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.06■□□□□ 0.96
PKP3Q9Y446 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PKP3Q9Y446 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PKP3Q9Y446 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PKP3Q9Y446 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
PKP3Q9Y446 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP3Q9Y446 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP3Q9Y446 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
PKP3Q9Y446 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PKP3Q9Y446 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.05■□□□□ 0.96
PKP3Q9Y446 MIR935-201ENST00000401179 91 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms