Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IFT52Q9Y366 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.62■□□□□ 0.73
IFT52Q9Y366 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IFT52Q9Y366 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
IFT52Q9Y366 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT52Q9Y366 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT52Q9Y366 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT52Q9Y366 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.61■□□□□ 0.73
IFT52Q9Y366 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT52Q9Y366 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.61■□□□□ 0.73
IFT52Q9Y366 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT52Q9Y366 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT52Q9Y366 AC096631.2-201ENST00000436136 790 ntBASIC19.61■□□□□ 0.73
IFT52Q9Y366 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.61■□□□□ 0.73
IFT52Q9Y366 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.61■□□□□ 0.73
IFT52Q9Y366 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.61■□□□□ 0.73
IFT52Q9Y366 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT52Q9Y366 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
IFT52Q9Y366 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
IFT52Q9Y366 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT52Q9Y366 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
IFT52Q9Y366 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IFT52Q9Y366 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IFT52Q9Y366 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT52Q9Y366 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT52Q9Y366 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.6■□□□□ 0.73
IFT52Q9Y366 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IFT52Q9Y366 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.6■□□□□ 0.73
IFT52Q9Y366 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.6■□□□□ 0.73
IFT52Q9Y366 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.6■□□□□ 0.73
IFT52Q9Y366 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.6■□□□□ 0.73
IFT52Q9Y366 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT52Q9Y366 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.6■□□□□ 0.73
IFT52Q9Y366 AC106739.1-201ENST00000617035 715 ntBASIC19.6■□□□□ 0.73
IFT52Q9Y366 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
IFT52Q9Y366 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT52Q9Y366 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT52Q9Y366 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.6■□□□□ 0.73
IFT52Q9Y366 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT52Q9Y366 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IFT52Q9Y366 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IFT52Q9Y366 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IFT52Q9Y366 AC009237.3-201ENST00000393279 1427 ntBASIC19.59■□□□□ 0.73
IFT52Q9Y366 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
IFT52Q9Y366 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IFT52Q9Y366 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFT52Q9Y366 AL157384.1-201ENST00000445995 2473 ntBASIC19.59■□□□□ 0.73
IFT52Q9Y366 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
IFT52Q9Y366 EDA-201ENST00000338901 1233 ntBASIC19.59■□□□□ 0.73
IFT52Q9Y366 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.59■□□□□ 0.73
IFT52Q9Y366 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.59■□□□□ 0.73
IFT52Q9Y366 AC099791.1-201ENST00000416440 715 ntBASIC19.59■□□□□ 0.73
IFT52Q9Y366 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFT52Q9Y366 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IFT52Q9Y366 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IFT52Q9Y366 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.59■□□□□ 0.73
IFT52Q9Y366 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
IFT52Q9Y366 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IFT52Q9Y366 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IFT52Q9Y366 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.58■□□□□ 0.73
IFT52Q9Y366 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
IFT52Q9Y366 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
IFT52Q9Y366 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IFT52Q9Y366 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IFT52Q9Y366 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.73
IFT52Q9Y366 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IFT52Q9Y366 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT52Q9Y366 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.58■□□□□ 0.72
IFT52Q9Y366 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.58■□□□□ 0.72
IFT52Q9Y366 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.58■□□□□ 0.72
IFT52Q9Y366 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
IFT52Q9Y366 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.58■□□□□ 0.72
IFT52Q9Y366 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
IFT52Q9Y366 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT52Q9Y366 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT52Q9Y366 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IFT52Q9Y366 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT52Q9Y366 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT52Q9Y366 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IFT52Q9Y366 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT52Q9Y366 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IFT52Q9Y366 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT52Q9Y366 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT52Q9Y366 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT52Q9Y366 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT52Q9Y366 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT52Q9Y366 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT52Q9Y366 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IFT52Q9Y366 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
IFT52Q9Y366 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms