Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC28.92■■■□□ 2.22
NINLQ9Y2I6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
NINLQ9Y2I6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
NINLQ9Y2I6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC28.92■■■□□ 2.22
NINLQ9Y2I6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC28.92■■■□□ 2.22
NINLQ9Y2I6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
NINLQ9Y2I6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
NINLQ9Y2I6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
NINLQ9Y2I6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC28.92■■■□□ 2.22
NINLQ9Y2I6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC28.92■■■□□ 2.22
NINLQ9Y2I6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC28.91■■■□□ 2.22
NINLQ9Y2I6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC28.91■■■□□ 2.22
NINLQ9Y2I6 AC069152.1-201ENST00000438030 544 ntBASIC28.91■■■□□ 2.22
NINLQ9Y2I6 AL138781.1-201ENST00000566567 1274 ntBASIC28.91■■■□□ 2.22
NINLQ9Y2I6 AL591742.1-201ENST00000604433 565 ntBASIC28.91■■■□□ 2.22
NINLQ9Y2I6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
NINLQ9Y2I6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
NINLQ9Y2I6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
NINLQ9Y2I6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
NINLQ9Y2I6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
NINLQ9Y2I6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
NINLQ9Y2I6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
NINLQ9Y2I6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC28.9■■■□□ 2.22
NINLQ9Y2I6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC28.9■■■□□ 2.22
NINLQ9Y2I6 GUSBP5-202ENST00000510805 1989 ntBASIC28.9■■■□□ 2.22
NINLQ9Y2I6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC28.9■■■□□ 2.22
NINLQ9Y2I6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
NINLQ9Y2I6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC28.89■■■□□ 2.22
NINLQ9Y2I6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC28.89■■■□□ 2.22
NINLQ9Y2I6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC28.89■■■□□ 2.22
NINLQ9Y2I6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC28.89■■■□□ 2.22
NINLQ9Y2I6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
NINLQ9Y2I6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC28.89■■■□□ 2.22
NINLQ9Y2I6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC28.89■■■□□ 2.22
NINLQ9Y2I6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.21
NINLQ9Y2I6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
NINLQ9Y2I6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
NINLQ9Y2I6 AC245052.3-201ENST00000450182 901 ntBASIC28.88■■■□□ 2.21
NINLQ9Y2I6 AC016405.3-201ENST00000607710 860 ntBASIC28.88■■■□□ 2.21
NINLQ9Y2I6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
NINLQ9Y2I6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
NINLQ9Y2I6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
NINLQ9Y2I6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
NINLQ9Y2I6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
NINLQ9Y2I6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC28.87■■■□□ 2.21
NINLQ9Y2I6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC28.87■■■□□ 2.21
NINLQ9Y2I6 AC093787.1-201ENST00000450396 207 ntBASIC28.87■■■□□ 2.21
NINLQ9Y2I6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC28.87■■■□□ 2.21
NINLQ9Y2I6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC28.87■■■□□ 2.21
NINLQ9Y2I6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC28.87■■■□□ 2.21
NINLQ9Y2I6 KRT18P6-201ENST00000555540 1265 ntBASIC28.87■■■□□ 2.21
NINLQ9Y2I6 AC008694.1-202ENST00000636953 945 ntBASIC28.87■■■□□ 2.21
NINLQ9Y2I6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
NINLQ9Y2I6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
NINLQ9Y2I6 MKRN4P-201ENST00000444706 1521 ntBASIC28.86■■■□□ 2.21
NINLQ9Y2I6 ECEL1P1-201ENST00000373592 1742 ntBASIC28.86■■■□□ 2.21
NINLQ9Y2I6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
NINLQ9Y2I6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
NINLQ9Y2I6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC28.86■■■□□ 2.21
NINLQ9Y2I6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
NINLQ9Y2I6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
NINLQ9Y2I6 RARRES2P4-201ENST00000514074 484 ntBASIC28.86■■■□□ 2.21
NINLQ9Y2I6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC28.86■■■□□ 2.21
NINLQ9Y2I6 AC098934.4-201ENST00000564127 592 ntBASIC28.86■■■□□ 2.21
NINLQ9Y2I6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC28.86■■■□□ 2.21
NINLQ9Y2I6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
NINLQ9Y2I6 AC091799.1-201ENST00000422823 811 ntBASIC28.85■■■□□ 2.21
NINLQ9Y2I6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC28.85■■■□□ 2.21
NINLQ9Y2I6 C11orf96-202ENST00000528572 1834 ntBASIC28.85■■■□□ 2.21
NINLQ9Y2I6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC28.85■■■□□ 2.21
NINLQ9Y2I6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
NINLQ9Y2I6 AC092118.2-201ENST00000613495 667 ntBASIC28.85■■■□□ 2.21
NINLQ9Y2I6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC28.84■■■□□ 2.21
NINLQ9Y2I6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
NINLQ9Y2I6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
NINLQ9Y2I6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
NINLQ9Y2I6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC28.84■■■□□ 2.21
NINLQ9Y2I6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC28.84■■■□□ 2.21
NINLQ9Y2I6 AC133041.1-202ENST00000642053 222 ntBASIC28.84■■■□□ 2.21
NINLQ9Y2I6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
NINLQ9Y2I6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
NINLQ9Y2I6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
NINLQ9Y2I6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC28.83■■■□□ 2.21
NINLQ9Y2I6 AC233723.2-201ENST00000623798 2106 ntBASIC28.83■■■□□ 2.21
NINLQ9Y2I6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
NINLQ9Y2I6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC28.83■■■□□ 2.21
NINLQ9Y2I6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC28.83■■■□□ 2.21
NINLQ9Y2I6 FAM21FP-204ENST00000608637 956 ntBASIC28.83■■■□□ 2.21
NINLQ9Y2I6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC28.83■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms